Gene Sfum_1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1496 
Symbol 
ID4460547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1852084 
End bp1853367 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content61% 
IMG OID639702263 
Producthypothetical protein 
Protein accessionYP_845620 
Protein GI116748933 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC ATGCGATTTT CTCAAAATCA AGGCTCTCCG AAAGGGACGG AGCGACGGTG 
ATCATTGTCG CCCTTGCCCT CGTGATGCTC CTGGGTTTCG GCGCCTTTGC CGTGGATATC
GGCTACCTGT ACGTGGTCCG AAACGAACTG CAGAACGCGG CCGACGCCGG GGCGCTGGCC
GGGGCGGCGG CACTCTACAA CAATGACGGC ACCGCGGTCC AACCGACGGC CAACGTGATC
GGGCAAGAGG CGGCCATGCG CAACACTGCG GTTCGAACGG CGGTGGAGGT GACTCTGAAC
GGCAATTCGG GGGACGTGCA GCGGGGGCAC TACTCATTCG CCACCGGAAC GTTCACGCCC
AATGCCTCGC TGCTGCCCGT GAGCCTCTGG AACGTGAGCA CCGAAGAGCT CGACGCCAAT
ACCGATTTCA TCAACGCCGT GAAGGTGACC ACCCACAGGA GCGCTCCGGC GGCGCCGTCG
TTCTTCTCGA GGATTTTCGG CTACGATTCC TTCGCCCTGG CGGCCGAAGC CGTGGCATAC
ATCGGGTTTG CGGGAACGCT GTATCCCCTT AACGTGGATA AGCCCATCGC CATGTGCCAG
GAAAGTCTTC TCGATGCCGA GGGCAACTAC TCCTGCTCCA TCGGGCGCAT GATCAACAGC
GGCTCGGGCG CCGGGCACAA CACCGCGGCG TGGACGAACT ACAGCCAGCC GTGCGAAACC
GCCAATGCAA ACGACATGGC CCAACTGCTG GCCGGTTGCG GCGGCTCCAA CCCCACACCC
ATCATTTTGG GCACGGGGAT GGGAACCAGC GGCGGCATGC AGGACAGCAC CTATCGCAAG
AGCATCTTCA GCTGTTGGAT CGATTCGCTT CGCGCCGGAA ATCCCCTCCC GCTGGTTCTT
CCCGTCGTGG AATGCCCCGG GAACAACCCC GGGCCCTGCT CGAAGGTGGT GGGGGCCGTC
GAGGTCACCG TGGTCTGGAT AACGGACGTG ATCAACACGA ACAAGCTCAA CTATGACGAG
GTGCCGTCGA TGATGAACAC GGCGGAAAAA GCCCCATGGG CGTGCAGCGT TCCTCTCACC
AAGGACTCCA CGCAGGCCCA GATCAACCAG TGCTGGAACG AGTTCGTGAG CTATTACAAT
CTGAAGAACG CCGACAACCA GAATGCGCCG ATCGCCAAGA ATTCCATCTA CATGCTGCCG
AGCTGCACCC CCCACGATCC CGAGGGCGGC ACGGGCGGGA AGAATTTCGG CATCCTTGCG
AAGATCCCGG TGCTCGTCCG GTGA
 
Protein sequence
MKKHAIFSKS RLSERDGATV IIVALALVML LGFGAFAVDI GYLYVVRNEL QNAADAGALA 
GAAALYNNDG TAVQPTANVI GQEAAMRNTA VRTAVEVTLN GNSGDVQRGH YSFATGTFTP
NASLLPVSLW NVSTEELDAN TDFINAVKVT THRSAPAAPS FFSRIFGYDS FALAAEAVAY
IGFAGTLYPL NVDKPIAMCQ ESLLDAEGNY SCSIGRMINS GSGAGHNTAA WTNYSQPCET
ANANDMAQLL AGCGGSNPTP IILGTGMGTS GGMQDSTYRK SIFSCWIDSL RAGNPLPLVL
PVVECPGNNP GPCSKVVGAV EVTVVWITDV INTNKLNYDE VPSMMNTAEK APWACSVPLT
KDSTQAQINQ CWNEFVSYYN LKNADNQNAP IAKNSIYMLP SCTPHDPEGG TGGKNFGILA
KIPVLVR