Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1492 |
Symbol | |
ID | 4461462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1848458 |
End bp | 1849336 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639702259 |
Product | SAF domain-containing protein |
Protein accession | YP_845616 |
Protein GI | 116748929 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAGAT TCAGAGCGAT ATTTCCGCTG GCCCTGGCGA TCGTATTGGC GCTGGTGGCC TCCGTTGTCG TCTACAAATG GGTTCAGATG AAGACCGGCG TGCAGACGAC GGTCGTCACG GAAAAGGCGG AGCCGGGAGG CGTGCAGGTG GCCCTGGCCA GCGCCGATCT CCCCTGGGGA ACCAAGCTGA CCCGGGAAAT GGTGAAGATG GCGGAATATC CTCCCAAGCA CCTGCCGGCC GGGTATTTTT CGGACCCGGC AAAGATCGAG GGCAGGGTCC TCATAACCCC GGTCAAGCAG GGTGAGCAGC TCCTGGAGTC CAAGCTCGCC CCCCTCAGCG TGACGACCGG TGGGGTGTCG GCGGTCGTCA GCGTGGGCAA GCGCGCCATC GCCGTGGCGG GTGACAAAGT CATCGGGCTG GCCGGTTTCA TCCAGCCCGG AAATTTCGTC GACGTGCTGG TCACCATCAG GGACACACAG GAAAAGACCC CCAGCACGAG CAAGGTGGTG CTGGAAAACG TTAAGGTGCT CGCCACCGGC ACGGTGATCG ACAAGAAGGC GGGGACCGAG CCGGGCCCGG TGGACGTCTT CACGCTCGAG GTCACGCCGG AGGAAGCGGA GCGGCTGGCG TTCGCGGCTT CCCTGGGCAA GCTCCATTTC GCCCTGAGAA ACGTGACCGA CACCGAGGTG GTTTACACCA TGGGGACGAC CATCGCCGAC GCGCTGGATG CCTACCGGCC CCGCATGAAA ATGGTGTCCG CCCAGCCCGT CGTGAAGTCC GAACCCGAAG CAAGGAAAGA ACAGGCGAGA TCCTTTTCCC GGATGGAAAT CATCAAGGGC TCCAAGGTCT CGCAGGTCGA TTTCGAAAAC AGGCGGTAA
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Protein sequence | MARFRAIFPL ALAIVLALVA SVVVYKWVQM KTGVQTTVVT EKAEPGGVQV ALASADLPWG TKLTREMVKM AEYPPKHLPA GYFSDPAKIE GRVLITPVKQ GEQLLESKLA PLSVTTGGVS AVVSVGKRAI AVAGDKVIGL AGFIQPGNFV DVLVTIRDTQ EKTPSTSKVV LENVKVLATG TVIDKKAGTE PGPVDVFTLE VTPEEAERLA FAASLGKLHF ALRNVTDTEV VYTMGTTIAD ALDAYRPRMK MVSAQPVVKS EPEARKEQAR SFSRMEIIKG SKVSQVDFEN RR
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