Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1471 |
Symbol | |
ID | 4461527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1824688 |
End bp | 1826739 |
Gene Length | 2052 bp |
Protein Length | 683 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639702238 |
Product | glycogen debranching enzyme GlgX |
Protein accession | YP_845595 |
Protein GI | 116748908 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0323823 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATCTA TGCGCGCAAT CGACGAATGG ATACCAGGCG AGGGAGTTCC ATGGCCCCTT GGGGCGAGTT GGATGGAGTC GCAACGGGCA TACAATTTCG CGCTCTTTTC GCGCAACGCC CGGAGCGTCA CCCTTTTGCT CTACACCGAG GACGATCCAG TCATCCCGGT CCAATTCCGT GTTCTTGACC CCGTCTTCAA CAAGACTGGC CTGATATGGC ATTGCGCGGT GCCGGAGGAG GAGCTGCGGG GCGCCTGCCT CTATGCGTAC CGAATCGACG GCCCTTACGA CCCGCTCAAC GGGCATCGAT TCGACGCGGG GAAAGTTCTC CTGGATCCCT TTGCCCTTTC CGTCCATTTC CCGCCCGGGT TCAGCCGAAC CTCGGCCTCG GGGTCGGGCC CCACGGACGG CATGGCACCC CTGGGGCGGC TCTCCAAGGA TCCGAACGCA TTCGACTGGG GCGAGGACCC GCGCCCTCGC CATGCCCACG ATCTCATCGT CTACGAACTG CACGTCAAGG GCTTCACGGC AAGGCCCAAC TCGGGCGTGA GCCCGGAAAA CCGAGGGACC TTTGCCGGGC TCGTGGAGAA GATATCGTAC CTGAAGGATC TCGGGATCAC CGCCGTGGAG CTCCTTCCCG TCCATCAGTT CGATCCCCGG GAGGGAAACT ACTGGGGCTA TATGACCCTC AACTTCTTCT CGCCCCACCA CGGTTACGCA TCAGGCGATC CCCACCGGGA ATTCCGTGCG ATGGTGAGAA CCTTTCACGC CGCGGGAATC GAGGTATGGC TCGACGTCGT CTACAATCAT ACCAGCGAGG GCGGCGAGAA CGGTCCCACC TACAGCTACC GCGGTGTGGA CAACAAAAGT TACTACCTCG CCCGGCAGGA TACCGGCGAG TACTTCAACG ACACCGGATG CGGGAACACA ATGAACTGCG CGCATCCCGT CGTTCGGGCA CTCGTTCTGA CCAGCCTGCA TCACTGGGCG AAAAACATGC ATGTGGACGG GTTCCGCTTC GACCTGGCAT CCATTTTCGC GCGCGCGCTC GACGGCTCCA TGAACACCCT GGACCCGCCG CTGATCGCGG AGATCGGCCT ACTCGGATAC ATGCGCGACG TGAGGCTCGT CGCGGAGGCA TGGGATATCG GGAGTTACCT GCTCGGTCGA AGCTTTCCCG GCCTGATGTG GCGCCAGTGG AACGGGAAAT TCCGCGACGA CATCCGCTCT TTCGTCAAAG GGGACGCAGC GATGGTCGGA GCCCTGATGC AACGCCTGTA CGGGAGTGAT GACCTTTTTC CGGACGGGCC GGTGGAGGTG TATCGCCCGT ACCAGAGCGT GAACTTCATC ACCGCCCACG ACGGTTTCTG TCTCTACGAT TTGGTTGCTT ACAACGAAAA GCACAACACG GCCAACGGCC ACCACAACAC GGACGGGGCA AACGACAACC GGAGCTGGAA TTGCGGCTGG GAGGGCGACT CCGGGGTTCC CCTTGAAGTC ATGGCGTTGC GCCGGCAGCA GGTCAAGAAT TTTTTCTGCC TGCTCATGCT TGCCAACGGA ACCCCCATGT TCTGCGCCGG TGATGAATTC ATGAACACAC AGAAAGGCAA CAACAACCCT TACAACCAGG ACAATGAGAT CACCTGGCTG GACTGGGAGC TTCTCGAACG CAACCGGGAC ATGCTGCGCT TCTTCAAGGG CATGATCCGA TTCCGAAAAA CGCATCCGTC CATCGGTCGG GGCCGCTACT GGCGCGAGGA CGTCCGGTGG TACGGAAGCA CGGGGGAAGT GGACCTTTCC CAGGAATCCA GGTCTCTGGC CTACTTTCTG CGCGGGTCCG GTCTCGGCGA CAGCGACCTC TACGTGATGA TCAATGCATA CTGGGAAGAC CTGGATTTCG CCCTCCAGGT CGGTCGGGCT GGGGAGTGGC GCCGTGTTGC GGATACTGCC CTTCCGAGCC CGGACGACAT TGCGGAGACG GGACGAGGAC ACCCCGTTTC CGGTCTCCGG TATCGCGTGA AGGCCCGATC GATCGTGGTT TTTGAGCGAT GA
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Protein sequence | MGSMRAIDEW IPGEGVPWPL GASWMESQRA YNFALFSRNA RSVTLLLYTE DDPVIPVQFR VLDPVFNKTG LIWHCAVPEE ELRGACLYAY RIDGPYDPLN GHRFDAGKVL LDPFALSVHF PPGFSRTSAS GSGPTDGMAP LGRLSKDPNA FDWGEDPRPR HAHDLIVYEL HVKGFTARPN SGVSPENRGT FAGLVEKISY LKDLGITAVE LLPVHQFDPR EGNYWGYMTL NFFSPHHGYA SGDPHREFRA MVRTFHAAGI EVWLDVVYNH TSEGGENGPT YSYRGVDNKS YYLARQDTGE YFNDTGCGNT MNCAHPVVRA LVLTSLHHWA KNMHVDGFRF DLASIFARAL DGSMNTLDPP LIAEIGLLGY MRDVRLVAEA WDIGSYLLGR SFPGLMWRQW NGKFRDDIRS FVKGDAAMVG ALMQRLYGSD DLFPDGPVEV YRPYQSVNFI TAHDGFCLYD LVAYNEKHNT ANGHHNTDGA NDNRSWNCGW EGDSGVPLEV MALRRQQVKN FFCLLMLANG TPMFCAGDEF MNTQKGNNNP YNQDNEITWL DWELLERNRD MLRFFKGMIR FRKTHPSIGR GRYWREDVRW YGSTGEVDLS QESRSLAYFL RGSGLGDSDL YVMINAYWED LDFALQVGRA GEWRRVADTA LPSPDDIAET GRGHPVSGLR YRVKARSIVV FER
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