Gene Sfum_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1443 
Symbol 
ID4460581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1788404 
End bp1788910 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content53% 
IMG OID639702212 
Producthypothetical protein 
Protein accessionYP_845569 
Protein GI116748882 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000637525 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGCCCCGA TTTTTGTAGG TGCCCCTTTA TTTCATGCGG ATTTCCAGCC CCGCAACCTC 
ACAAAAACTA AAAAAGCCGA AGGCACACGA CCTTTGTGTT TATGCTTGGC TCTGTCATGT
GGATACGTGC TAAACGATCA GGCCTGTATC TACAGACAAC CAAACGCAAT AACAGAGATG
GATCGGTGGT CGAGTACTAC CAACTCGCTC ACAATATCCG CCATCCAGCG AACAGGGGAA
CCCGTCGCCG ACATCATCCA TAATTTCGGG AGGTCCGACG AGTTCGACCG GGATGATCTC
GCGCGGCTGT GCCGCTCCAT CGCCAGGGTT TGCTGCGTGG ACATTCATGA TCCTATTGAA
TCTGCCGCAT GTCCTGCAAG CGGTGTGCAA TCCTCCATCC TGCCTGAAGG GGTGCGGCAA
GCCGGAGGCA AACGGAAGAT GTTTCCCCTG CTCCATCGAC CCCGAAATGA CCAGAGTTTC
CTCCAGAAAG CTCGAAATAA TTCTTGA
 
Protein sequence
MAPIFVGAPL FHADFQPRNL TKTKKAEGTR PLCLCLALSC GYVLNDQACI YRQPNAITEM 
DRWSSTTNSL TISAIQRTGE PVADIIHNFG RSDEFDRDDL ARLCRSIARV CCVDIHDPIE
SAACPASGVQ SSILPEGVRQ AGGKRKMFPL LHRPRNDQSF LQKARNNS