Gene Sfum_1433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1433 
Symbol 
ID4460484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1774325 
End bp1775467 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content62% 
IMG OID639702201 
Productpeptidase M23B 
Protein accessionYP_845559 
Protein GI116748872 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.484783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.146294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTTCCC AGTATCTCGA GCGGTTTGCC ATACGGCATC ACATCGTTCG CGCCGGCGAA 
TCCCTCTCCG GGATCGTCGA GTCCTCGGGC CTTCCCGCGG CGGTCATCGG CCAGTGGGAA
AAATCCTGCC GCAACTTCCC CGCGCTCAGC CAGATCAAGC CCGACGACGA GCTCATCATA
CACGTGGGCC GCAGCGACAA CCAGCCGGTG AAGCTCATCC TGTCCGCGGC TCAAGGTTCC
ACGTACACGC TGCGCAGAGT CGGCACCGAA TGGAACTGCC GGGATGACGG GAGCAGCCCT
CTGCCCATCG GAAACACGGT CCGGGGCGTT TATGCCGAGG ATCTCTACGA ATCTTGCATC
GGAGCCGGTC TGCCGGCGGC CCTCGTGGCG GATCTGACCG ATATCTTCGC CTACGACGTC
GACTTCAACT CGGATCTGAA AGAAGGCGAC ACCTTCGTCG TCCACTACGA AGATTGGGTG
AAGGACGGCC GGAAATCGCG GCCGGGGGTC ATCCTGGCGG CCGAGTTCAC GGCTTCCGGG
CAGCGCTTGC AGGCTTTCCT CTACCAGTTC CCGGACGGGG CCACGGAATA CTTCGACGCC
AAGGGAACGT CGCTTCGCAA ACCCTTTCTG AAGAGCCCCC TGAACTACCG GCGGATCATG
GCCGCATCGA ACTACAAGCC TTTGAAACCG ATTCTCAAGA TCTACCGGCC GCACCTGGGC
GTGGATTACA CGGCACCGAA GGGAACGCCG GTCAGCGCGG TGGGAGACGG GACGGTCGCG
GCCATGGGAA GAACGGACAA GGCGGGCCGC TTCATCCAGA TCGTGCACAA AGGCGGCTAC
AAGACCCATT ACGGTCACCT GTCCGCCTTC AGCAAAGGAC TCGCAAAAGG CAGGAAGGTG
ACTCAGGGTG AAATCATCGG CCTGGTGGGC TCCACCGATG CCTCGACGAC GCCCTACCTC
GACTTCCGCT TCGTCCGTAA CGGTAAACCG GTCAATTATC TCAAGTCGGA TTTCCCCCGC
TCCCGCACCA TTCCGAAAAC GCTGCGGCTC GATTTTGAAA AAAAGCGCGA CCTCGGCCAG
GCCGCCCTCG ACGGCAGTTC CGCCCCCACG GCGAATACCG CCGAAGGTCC GACCAGCGGG
TGA
 
Protein sequence
MRSQYLERFA IRHHIVRAGE SLSGIVESSG LPAAVIGQWE KSCRNFPALS QIKPDDELII 
HVGRSDNQPV KLILSAAQGS TYTLRRVGTE WNCRDDGSSP LPIGNTVRGV YAEDLYESCI
GAGLPAALVA DLTDIFAYDV DFNSDLKEGD TFVVHYEDWV KDGRKSRPGV ILAAEFTASG
QRLQAFLYQF PDGATEYFDA KGTSLRKPFL KSPLNYRRIM AASNYKPLKP ILKIYRPHLG
VDYTAPKGTP VSAVGDGTVA AMGRTDKAGR FIQIVHKGGY KTHYGHLSAF SKGLAKGRKV
TQGEIIGLVG STDASTTPYL DFRFVRNGKP VNYLKSDFPR SRTIPKTLRL DFEKKRDLGQ
AALDGSSAPT ANTAEGPTSG