Gene Sfum_1405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1405 
Symbol 
ID4461600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1747042 
End bp1747878 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content64% 
IMG OID639702173 
Producthypothetical protein 
Protein accessionYP_845531 
Protein GI116748844 
COG category[S] Function unknown 
COG ID[COG1912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.01301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCCG GTGTGCCCCC ACGGATTCTG CAAGAGAACA GGAGCGGTGT GAAGTCTCCG 
ATTATCACAC TTCTGTCCGA TTTCGGCTTG AGCGACGGGT ACGTTGCCGG GATGAAAGGC
GCGATCCTGA AGATCTGCCG AAACGCCGTC CTGGTGGACA TAACGCACCT GGTCCCGCCG
GGGGACATCC GTGCCGGCGC TTTCCTGCTG GCTGCCGCGT ATCCCGATTT CCCCCGGGGC
ACAGTCCATC TGGCCGTGGT GGATCCCGGC GTCGGCACCG GGCGCATGCC TCTCGTCATC
ATGACGCCCC GCGGTTTTCT CATCGGGCCC GACAACGGTC TGTTCTCACT GGTCCTGGAA
AAGGAAACCC CGACGGAAGC CCGTGCCATC GAGAATCCGG CCTTCAGGCA TTCCAGGGTC
AGCATGACCT TCCACGGTCG GGACATTTTT GCGCCGGCGG CGGCCCATCT CGCTTCCGGA
GCGGCCTTTG CCGAATTCGG CCCGGTTTGC ACGCCCCATG TCGCTCGATG GAGCCGGGCC
ACGAGAATCG GCGACGAACT GCGCGGTGAA GTCATCCACA TCGACCGCTT CGGCAACGCC
ATAAGCAACA TCGACGAAGG GATGCTGCGC GAGTTTGCCG CGAAAGGACG GGCACGGGCG
CAGATCCGCG GGCAAAGCCT TCCCCTGGTG AGCACCTACG GGGACCTTGA ACCCGGGGCC
GCGATGGCCC TCATCGGGGG CGGCGGACAT CTCGAAATCG CCGTCAACCG GGGCAGCGCC
GCCGACAGAT TTCGAATCGC CCCCGGTGAA CCGCTCCGGG TCTTCCTCGA TCAATAA
 
Protein sequence
MRAGVPPRIL QENRSGVKSP IITLLSDFGL SDGYVAGMKG AILKICRNAV LVDITHLVPP 
GDIRAGAFLL AAAYPDFPRG TVHLAVVDPG VGTGRMPLVI MTPRGFLIGP DNGLFSLVLE
KETPTEARAI ENPAFRHSRV SMTFHGRDIF APAAAHLASG AAFAEFGPVC TPHVARWSRA
TRIGDELRGE VIHIDRFGNA ISNIDEGMLR EFAAKGRARA QIRGQSLPLV STYGDLEPGA
AMALIGGGGH LEIAVNRGSA ADRFRIAPGE PLRVFLDQ