| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1355 |
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| Symbol | |
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| ID | 4460525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1682181 |
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| End bp | 1683233 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639702123 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_845481 |
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| Protein GI | 116748794 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.403808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGAA CGTACATCCT GGAGCAGGGA GCGTATTTGC GCAAAGCGGG CAATCACCTG
GTCGTGACCA AGAACCGGGA GATCATAGCG GAGATCCCGC TGGAAGGCCT CAGCCAGCTC
ACCCTGGTGG GCTTTTCCTC CCTCAGCGGA GCGGTCCTGG AAGTGCTCAT CCGCCACCGC
ATCGAAACGG TGTTGCTCAG CCCCAGGGGA CAGTTTCGCG CCAGGCTCAT GGTGGATGAA
CACAAGCACG TCCAACGACG GCAGGGTCAG TACGTCAAGC TTTCCGGGGC CGATTTCGCA
CTGAGGACCA CTCAGAGCAT CGTCCGGGGA AAGCTGCGAA ACACGGCCCG CTTTCTGGCA
CTGCGAGGAA GCAGGTACGG GAGCGAGGCG CTCCACCGGG CGGCGGCACA GATCAAGGGA
CTGTCGGCTC TCGTCGATCG ACAGAAAGAC ATGGACCTGC TGCGCGGGAT CGAGGGGCAT
GCGGCGAACC TGTACTTCGA AGTGTTCCCG CTCCTCGTCC GGGTCCCGGG TTTTGAATTC
AACGGCCGCA ACCGGCGTCC GCCCCTCGAC CCGCTCAATG CGCTTCTCTC GTTTGTCTAC
ACCCTGCTCA CGCAGGAGGT CCTGACGGCC ATCAAGGTCG TGGGGTTGGA CCCTTACCTC
GGCTGCCTTC ACGCGGTCGA CTACGGCAGG CCCTCGCTGG CCTGCGACCT GGTGGAGGAA
TGGCGCACTT TCCTGGGCGA CCGGCTCGTG CTGGCGCTCG TCAACCGTCG CGTCATCGGC
CTCGACGATT TCGTCTACCG TCCCACCCCG TGCGCGGACG CAGTAGACGA AGAGGAGCTG
AAGCATCGCC GGCCGGTGGA GATGAAACCG AAGATCGCCC GGGCATTCAT CGAAGCTTAT
GAGAAGTGGA TGGCAAGCCG TATTCTGGAC CCGGGTTCGA GGGAAAGGAC GGACTATCGC
GGGCTCATTC AGCGCCAGGT CTGGAAATTC TGTCATTATC TCGTGGGGGA CCGCGACTCT
TATGAGCCGT TCATCTGGTC GGAGGTCTCC TGA
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| Protein sequence | MERTYILEQG AYLRKAGNHL VVTKNREIIA EIPLEGLSQL TLVGFSSLSG AVLEVLIRHR
IETVLLSPRG QFRARLMVDE HKHVQRRQGQ YVKLSGADFA LRTTQSIVRG KLRNTARFLA
LRGSRYGSEA LHRAAAQIKG LSALVDRQKD MDLLRGIEGH AANLYFEVFP LLVRVPGFEF
NGRNRRPPLD PLNALLSFVY TLLTQEVLTA IKVVGLDPYL GCLHAVDYGR PSLACDLVEE
WRTFLGDRLV LALVNRRVIG LDDFVYRPTP CADAVDEEEL KHRRPVEMKP KIARAFIEAY
EKWMASRILD PGSRERTDYR GLIQRQVWKF CHYLVGDRDS YEPFIWSEVS
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