| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1345 |
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| Symbol | |
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| ID | 4460515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1669365 |
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| End bp | 1670537 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639702113 |
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| Product | CRISPR-associated RAMP Csm5 family protein |
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| Protein accession | YP_845471 |
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| Protein GI | 116748784 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1332] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01899] CRISPR-associated RAMP protein, Csm5 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAT ATCATTTCAA GGCTCAGGCA CTGACGCCAA TTCACATTGG TTCAGGAAAT
GAAATTGATC CCTTGGAGTT TATCCTTGAA GGGAACAGGT TGGTCCGTTT TAACCCGGCT
GATGTCGTCA ATGGGTTGTC TGGGGAAGAG CTGCGTCGAT ACTCGCAATT GGTGGAAAGG
GCGGATCTCA AGGGAATCCA AGCCTTCTTA CGAACGCATC TCGACGCGGC GCATCACGAC
CACGTTTATG TGGACGTCTC AAAGGAATTT AAAAGGCTGT TTGAGGAGAA AGCGAGCAAT
CCTAGCAATC AATTCCGAGT GGACATGATG CCGCACAATC CTCATTCCGG CGCAGTATAT
CTACCCGGTT CCTCCATTAA AGGTGCGATT CGCACTGCCG TAATCAATTA CTTCGCCAAT
ATTGAACCGG CTACGAAGTC AACCGTTCAC CAGACCGTCG GGGCTGAACA AAATCTCAGG
AACAAAGCAC GGATCTTGGA AGAATCCGCG CTTGACCGCC GTCACAGCCA AACGGAGCGA
GATGTTCTTA GGCTCTTGGA TGTGCAGGAT GTCGACCTTC CAAACGACGC CACTCGCATT
GACCGTGCGC TGAACTATAA CCCTCAAAAA CAGGGCTCAC AAGAGATCCA AATTTGGGTA
GAGAGGGTCA AGGCCTTGGC GGATGGAGGC GGAGCGCCTC AGTTTGAGGT CACTTTGCAC
CTGGACACAG CTGCCATGAA ACATCCAGGG ATGAAGGCTA CTCTGGGGAG AACACTTGAC
TTTGACACCA TCCTTAGAGC GTGCAACCTT TTTTACTGGG GGAGAATGAC AGCCGAAGGA
GAGAAATTCG ACCAAAAGAA GTCCGGTGGG AAATCCTGGA AAGCTCTGCA CGAGTTGTTT
CCCAAGGGGA AGACCCCAGA TGGCCAGATA GTAGCCATTG ACCCGTCTAA GAACTACTGG
TGTTACCCCC AAAGAAAACG CATGTTGCTC CGGGTCGGCC GATTCTCTCA TTTCGAGTCG
CTCTCCGTTG ATGGTTTGAG GGAGGGGTAC AATATTCAGG CAAGAACCCC TATCGAAGAC
ATGGGAGCCA CACGCACCCG ATGCTCCATG GAGAATGGCA GGCCAGCCAT GCCTTTTGGG
TGGCTAATCC TCACTTTGGA AAGAACCCTG TAG
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| Protein sequence | MSAYHFKAQA LTPIHIGSGN EIDPLEFILE GNRLVRFNPA DVVNGLSGEE LRRYSQLVER
ADLKGIQAFL RTHLDAAHHD HVYVDVSKEF KRLFEEKASN PSNQFRVDMM PHNPHSGAVY
LPGSSIKGAI RTAVINYFAN IEPATKSTVH QTVGAEQNLR NKARILEESA LDRRHSQTER
DVLRLLDVQD VDLPNDATRI DRALNYNPQK QGSQEIQIWV ERVKALADGG GAPQFEVTLH
LDTAAMKHPG MKATLGRTLD FDTILRACNL FYWGRMTAEG EKFDQKKSGG KSWKALHELF
PKGKTPDGQI VAIDPSKNYW CYPQRKRMLL RVGRFSHFES LSVDGLREGY NIQARTPIED
MGATRTRCSM ENGRPAMPFG WLILTLERTL
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