Gene Sfum_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1298 
Symbol 
ID4461134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1600226 
End bp1601056 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content60% 
IMG OID639702067 
Producthypothetical protein 
Protein accessionYP_845425 
Protein GI116748738 
COG category[R] General function prediction only 
COG ID[COG1355] Predicted dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.495257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.744875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGCCG AGAGAATAAG AGAATCGGTC ATAGCCGGGA GCTGGTATCC CGACAACCCC 
GGTGCCTTGA GAAACGAGAT CGCGGGCTAT CTCAAGCGGG CCCGGCCGCA CCCCGGCAGG
GAGAACCTGA TCGGCCTCGT GGCCCCGCAC GCGGGATACA TGTATTCGGG CGAGGTTGCC
GCTCACGCGT ACCGGCAATT GGAGGGCAGC CGCTTCGAGC GCGTGCTGAT TGTGGCCCCA
AGTCATCGAA CCCGTTTTCC ATCGTCAACC ATTTACCACC TGGGAGGCTT CCGGACTCCC
CTGGGGGTGG TCCCGCTCGA TGTCGACCTC GTCCAGGCGT TCCTGGAACA CCCGCAGCTC
AGAGGATATT ATCCCCAGGC GGAAGACCAG GAGCATTCAC TCGAAATTCA GCTGCCGTTC
CTGCAGGTTG TGCTCGGCGA GTTCAAACTG GTGCCGATCA TCATGGGCAA CCAGACTTAC
GAGCATTGCA CAGAGCTGGC GGAGCTCATC GAGAAGCTGT GCAGGAACAA GAACGTGTTG
CTGATCGCCA GCAGCGATTT GTCCCATTAT CACTCGTACC GTGAGGCAAA ACAACTGGAC
GGGATAGTGA CCGCGAGAGT CGCGGCATTC GACTGCCAGG GTCTTTTCCG GGACCTGAAC
GACGGGGCCT GCGAGGCGTG CGGCGCCGGT CCGATGGTCG CAGTCATGCT TGCAGCCGGG
AAGCTGGGAG CGAATGTGTC GAGGGTTTTG CATTACGCCA ACTCCGGCGA TGTCACGGGA
GAACGCAGTG GTGTGGTCGG CTATATGGCG GCGGCTTTCT ACAGGGAGTA A
 
Protein sequence
MCAERIRESV IAGSWYPDNP GALRNEIAGY LKRARPHPGR ENLIGLVAPH AGYMYSGEVA 
AHAYRQLEGS RFERVLIVAP SHRTRFPSST IYHLGGFRTP LGVVPLDVDL VQAFLEHPQL
RGYYPQAEDQ EHSLEIQLPF LQVVLGEFKL VPIIMGNQTY EHCTELAELI EKLCRNKNVL
LIASSDLSHY HSYREAKQLD GIVTARVAAF DCQGLFRDLN DGACEACGAG PMVAVMLAAG
KLGANVSRVL HYANSGDVTG ERSGVVGYMA AAFYRE