Gene Sfum_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1285 
Symbol 
ID4460868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1583671 
End bp1584828 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content56% 
IMG OID639702054 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_845412 
Protein GI116748725 
COG category[C] Energy production and conversion 
COG ID[COG1150] Heterodisulfide reductase, subunit C 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.699767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATC GAGTTGACCC CAACTTGATG AAAGATCTGG AGGCCTTCGG ACTGAAGGAT 
GCCGCCAAGT GTTATAATTG CGGAACCTGT ACGGCGGTGT GTCCGCTATC GACGCCGGAC
AATCCTTTTC CGAGGAAAAT GGTCAGGTAT GCGCAACTTG GGCAGAAGGA CAAGATCCTC
GCGTCCCCGG AACCCTGGCT CTGCTACTAC TGCGGCGACT GCTCCACTCG ATGCCCGCGA
GGCGCCGAAC CGGGCGAAAC AATGATGGTC ATGCGCCGTT ATCTCACTTC CCTGTACGAC
TGGACGGGGT TCGCTCGCAA GTTCTACACT TCCGAGAAAT TCGAAATCAT GGCGGTCTCC
ATCGTCGGAT TGCTGGTCGG AATCGGCCTT CTGATTTTCA ACACGGGCAA GCCCAACTGG
GAACATGCCT ACCTCAATTC CTTGTGGCCG GCGCACAGTA TCGAAATCGC AGACCTTGTC
ATGGCCGCGA TCTTGTCGTT CCTGCTTCTG AGCAACGTCT TCCGATGCTT CAAAGCCGTA
ATGGGGGATC TGGCGTTCAA GATTCCCCTG AAGATGTACG CCGGCGAGGT CAAGGAGCTC
TTGATTCACA CCTTGACCCA GAAACGCTTC GGGCTTTGCA CGGATAAGAA ACAGTGGTTC
GTGCACCTGA TGATCATGAC CGGGTATGCT TCGGTGTTCC TGCTGGTTGT CGTCTTCATT
CGGTGGTTCC AGCGGGATGC GGAAATCTAC CCGATCTGGC ATCCCATCAG GCTCGTGGGA
TACTACTCGA CCTTTGCCAT CATGTACGGC ACGACCTACG CCATCATCGG CCGTTTGAAA
AAGAGCAAGC CCCCGTACAA GAATTCCCAT GGAACCGACT GGATGTTCCT GATTCTTTTG
CAGCTGACCA CAATGACCGG TATCTTCATC CACTTCACCC GCCTCCTCGA CTGGCCCTTG
CCCACCTACG CCCTCTACAT CATCCACATG ATGGTGGCCA TCCCGATGCT GGTCCTGGAA
GTGCCGTTCG CCAAATGGGC GCACCTTGCC TACAGGCCCG TGGTGCTCTT CCTGCTGAAA
GTGAAGGAAA AATACCTGGC GGCGGAACCG GTTGCGGCCC CCGCTCTTGC CGTGGACAAG
GCGGCAGTGG CGGAATAA
 
Protein sequence
MSNRVDPNLM KDLEAFGLKD AAKCYNCGTC TAVCPLSTPD NPFPRKMVRY AQLGQKDKIL 
ASPEPWLCYY CGDCSTRCPR GAEPGETMMV MRRYLTSLYD WTGFARKFYT SEKFEIMAVS
IVGLLVGIGL LIFNTGKPNW EHAYLNSLWP AHSIEIADLV MAAILSFLLL SNVFRCFKAV
MGDLAFKIPL KMYAGEVKEL LIHTLTQKRF GLCTDKKQWF VHLMIMTGYA SVFLLVVVFI
RWFQRDAEIY PIWHPIRLVG YYSTFAIMYG TTYAIIGRLK KSKPPYKNSH GTDWMFLILL
QLTTMTGIFI HFTRLLDWPL PTYALYIIHM MVAIPMLVLE VPFAKWAHLA YRPVVLFLLK
VKEKYLAAEP VAAPALAVDK AAVAE