Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1254 |
Symbol | |
ID | 4460680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 1547669 |
End bp | 1549207 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639702022 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_845381 |
Protein GI | 116748694 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACC CGAGAAAGAC GAGGCCTATC CTGGTCATCG GCGCAACCGG GTACATCGGG GGCCGCCTGG TGCCGAAGCT GCTCGAACTG GGGTATACGG TTCGGGTGAT GGGCCGGTCC CTGTCCAAGC TGGAATCGCG GCCGTGGGCC ACTCATGCGA GGCTCGAAGC GGTGCGGGGG GACGTACTGG ACGTCCGGTC CCTCAAGAGA GCGGTGCGGG GGTGCTGGGC GGCATTCTAC CTGGTCCATT CCATGAGCAC GTCCCATCGG GATTTTGCCG ATTTGGACCG TCTTGCGGCG TGGAACATGG TCGAGGCGTC GGGCGGCTCA ACGCTTGAGC GCATCATTTA CCTCGGGGGG CTGGGGGACG AGAGCGACCC GATGCTCAGC AAGCACCTCC GCTCCCGGCT GGAGGTGGCG AGAATTCTGC GCACCGGTCC CGTTCCGGTC ACCACCTTGC GGGCTGCGAT GATCCTCGGG TCGGGGAGCG CCTCGTTCGA AATACTGCGT TACCTTGTCG ACCGGCTCCC CGTCATGCTC ACGCCGCGCT GGGTACACAC CCCCGTCCAG CCCATCTGCA TCAGGAACGT GCTCAACTAC CTTGTGGGCT GCCTCGAAAA GGAAGAAACG ATCGGGCAGA CCTTTGACAT CGGGGGACCG GAGGTGGTCA CTTACGAGCG CCTGATAAGG ATCTACGCCT GCGCGGCGGG CCTGCGCGAG CGGGTCGTCA TCCCGGTCTC GTTCATATCC CCGCAAATGA GCGCGCTCTG GATTTCCTTC GTAACCCCCG TTCCGGCCCC GCTGGGGAGG GCTCTGACCG AAGGGCTCCT CAACGAGGTG GTGTGCAGGG ATGAACGCAT ACGCCGGATC ATCCCGCAGG ATCTCATGAC GTGCCGGGAT GCGATCGAGC GCGCCATCGA GAAAATCGAG CGTCATCGGG TCGAAGCCTG CTGGACCGAT GCGGGCCGGC TTCTGCCTCC CGAATGGACC TACTGCGGGG ATGAGCCATA CGCCGGCGGA ACCGTCCTGG CTTGCGCCTA CAGGATACGG ATCGAGGCAT CGCCCGGGGA GATCTGGGAA CACATCGTCA GGATCGGAGG GCGAACCGGG TGGTACTATG GCGGGCCGCT CTGGAGAATC CGCGGATGGC TGGACAAGCT GTTCGGCGGA ACCAGTCTCC TGCGCGGAAG GCGGGACCCA AGGAACCTCT ACGTCGGCGA TGCCCTGGAC TTCTGGAGAG TGCTCGAAGT CTCCGCCCCT TTCCGGCTGC TTTTGCTCTC GGAGATGAAG CTCCCCGGCG AGGCCATCCT GGAGTTCAGA ATTTGCCCGC TCGGTCGGAA CGAATGCGAG CTCCAGCAGG TGGCGCGCTT TCTCCCCAAG GGTTTTCTCG GTCTTGCCTA CTGGTACAGT CTGTACGGCG CTCATCGGAT ACTTTTCAAG GGAATGCTTC GCACCATTGC GCGGGAAGTT GGAAAGCCGG TGACAAGAGG TCCCGAGCGA TTCGAGCCAG GGCTCAACCT TGTTTGCCGC ATAGACTAG
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Protein sequence | MSDPRKTRPI LVIGATGYIG GRLVPKLLEL GYTVRVMGRS LSKLESRPWA THARLEAVRG DVLDVRSLKR AVRGCWAAFY LVHSMSTSHR DFADLDRLAA WNMVEASGGS TLERIIYLGG LGDESDPMLS KHLRSRLEVA RILRTGPVPV TTLRAAMILG SGSASFEILR YLVDRLPVML TPRWVHTPVQ PICIRNVLNY LVGCLEKEET IGQTFDIGGP EVVTYERLIR IYACAAGLRE RVVIPVSFIS PQMSALWISF VTPVPAPLGR ALTEGLLNEV VCRDERIRRI IPQDLMTCRD AIERAIEKIE RHRVEACWTD AGRLLPPEWT YCGDEPYAGG TVLACAYRIR IEASPGEIWE HIVRIGGRTG WYYGGPLWRI RGWLDKLFGG TSLLRGRRDP RNLYVGDALD FWRVLEVSAP FRLLLLSEMK LPGEAILEFR ICPLGRNECE LQQVARFLPK GFLGLAYWYS LYGAHRILFK GMLRTIAREV GKPVTRGPER FEPGLNLVCR ID
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