| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1220 |
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| Symbol | |
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| ID | 4460645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1507623 |
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| End bp | 1509551 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639701987 |
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| Product | selenocysteine-specific translation elongation factor |
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| Protein accession | YP_845347 |
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| Protein GI | 116748660 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00584658 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.153868 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGG TCATTTTAGG CACGGCGGGA CACATCGATC ACGGCAAAAC CTCATTGATC
AGAGCGCTTA CCGGCATCGA CACGGATCGC CTCAAGGAAG AGAAGCTCAG GGGCATCACC
ATCGAGCTCG GGTTTGCCCA CATGGATCTC CCCGACGGAA ACCGGCTCGG CATTGTCGAC
GTCCCGGGCC ACGAGCGGTT TGTCAAGCAC ATGGTCGCCG GCGCGACCGG GATCGACCTG
GTTGCGCTCG TTATTGCCGC CGATGAGGGG GTCATGCCCC AAACCCGGGA ACATATGGAG
ATCTGCGAAC TGCTTCGCGT CAAGCAGGGA TTGGTCGTAC TCACCAAGAT CGACCTGGTG
GACGATCCCG ACTGGCTCGA GATGGTGCGT GAAGACGTCG CGGATTTTCT CAAGGGCACT
TTCCTGGAAG GGGCGCCGAT CCTTTCCGTC TCGGCGGCCA CCGGAGAGGG GATCGGCGAG
CTCAAGCAGG CACTGACCCG CCTTTATGAA GAAGTTGAAC CCCGGAGCGT CGAAGGACCG
TTCCGCCTGC CTGTGGACCG GGTGTTCACC ATGCGCGGAT TCGGGACCGT CATCACCGGC
ACGAGCATGT CGGGCCGGCT GCGCATCGGT GATCCGGTCA TGATCTACCC CTCGGAGCTG
AAATCGAAAG TGAGGGGGCT TCAGGTGCAC AGCAAGGAAG TCCAGGAAGT CCTTCCCGGA
CAGCGAACCG CCATCAATCT GCAAGGCATG GAACGGGCGT TGATCCAGCG GGGGGATGTG
GTGGCCACCC CGGGGGCCGT CGTGGCAACC CATATGGTCG ACGTGCAAAT GGAGCTCCTG
GCCGCGGCGC CGCGCCCTCT CAAGCACAGG GCAAAGGTCC GGTTTCATAC CGGCACCGCC
GAACACATCG CCACCGTGGT TCTCCTCGAC CGGGTGGAAC TGCTCGCGGG AGAAGGAGCC
TTCGCCCAGA TCCGCCTGGA TCAGCCCATT GCCGCATTGC GCGGAGACCG TTTCGTGGTC
AGGTCCTACT CCCCTGTCCA GACCATCGGA GGGGGGAGCA TCCTGAATCC GCTGCCCCGA
AAACACAAGG GCCACGAAAA ACGCGAAGCC GCCAAGGCCC TCGAGACCCT CTCCAATAGC
AACGACGCCG AGATTCTTGT ATGGCATATC CGGGCCGCCG GATGGGCCGG CCTGTCCCAG
GACGAACTGC AGGTTCGCGC CAATGTGTCC CCCAAAACCA CTGAAAAAGA GCTGCACCGG
CTGATCAGCC AAAAGACCGT CACCCTGTTC GACAAGGACA ACCGGCGCCT CATCGACCGG
CAAGCCCTGG AAGAACTCCG CCAGGCCGTC CTGAGCACCC TTGCCGAGTA CCACAAACGC
TTTCCCCTGA AGACGGGCAT GCCCAAGGAG GAGCTTTCGG CACAGCTCGG CAAGCCGGTT
GAAGTCAAGC TGTATAATTT CGCCTTGAGG AGTCTCACCG ATGAGGACCG CATCGCACAG
GAAATGGAGT GGGTGCGTCT GAAGTCCCAT AAGATCGATC TTTCCGGGGA CGAGGATGTC
ATTCGGCGAA AGATCGAGCA GGTCTTTCGC GCCGCGGGCC TTCAACCGCC GTTCGTCAAA
GAGATCGCCG CCGACCTGCC CGGCACTTCG CGGCAACACC AGGACGTGCT CGAATGGATG
GTGTCCCAGG GGATCCTCGT CAAGGCAAAA GAGGACATCT ATTTTCATGC CGCGGCCATG
GCCGAGCTGC AAGCTCGACT GGTGGCGTTT CTCAAGGAGA ACGGCGAGAT TTCAACCCCT
CAATTCAAGG AAATGACTCA GGCCAGCAGA AAATACACGA TTCCGCTGCT CGAATACTTC
GATTCGCAGA AGGTGACCAT TCGCATCGGA GACATGCGCA GGCTGCGGGA AAGCAAGGCC
GGCCAGTGA
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| Protein sequence | MKQVILGTAG HIDHGKTSLI RALTGIDTDR LKEEKLRGIT IELGFAHMDL PDGNRLGIVD
VPGHERFVKH MVAGATGIDL VALVIAADEG VMPQTREHME ICELLRVKQG LVVLTKIDLV
DDPDWLEMVR EDVADFLKGT FLEGAPILSV SAATGEGIGE LKQALTRLYE EVEPRSVEGP
FRLPVDRVFT MRGFGTVITG TSMSGRLRIG DPVMIYPSEL KSKVRGLQVH SKEVQEVLPG
QRTAINLQGM ERALIQRGDV VATPGAVVAT HMVDVQMELL AAAPRPLKHR AKVRFHTGTA
EHIATVVLLD RVELLAGEGA FAQIRLDQPI AALRGDRFVV RSYSPVQTIG GGSILNPLPR
KHKGHEKREA AKALETLSNS NDAEILVWHI RAAGWAGLSQ DELQVRANVS PKTTEKELHR
LISQKTVTLF DKDNRRLIDR QALEELRQAV LSTLAEYHKR FPLKTGMPKE ELSAQLGKPV
EVKLYNFALR SLTDEDRIAQ EMEWVRLKSH KIDLSGDEDV IRRKIEQVFR AAGLQPPFVK
EIAADLPGTS RQHQDVLEWM VSQGILVKAK EDIYFHAAAM AELQARLVAF LKENGEISTP
QFKEMTQASR KYTIPLLEYF DSQKVTIRIG DMRRLRESKA GQ
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