Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1213 |
Symbol | |
ID | 4460638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 1499505 |
End bp | 1501310 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639701980 |
Product | DNA primase |
Protein accession | YP_845340 |
Protein GI | 116748653 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.140428 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACTC TTGTGAAGCA GGCCGTTGAC ATTGTCGACG TGGTCGGACA GGTCGTCCAG CTGCGGCGCT CGGGCAACAG GCACCTGGGA CTGTGCCCGT TTCATCAGGA GAAGACCCCA TCGTTCCATG TCGATGCCGA AAACCAGCTT TACTACTGCT TCGGGTGCGG CAGCGGAGGG GACGTCCTCA ACTTCGTGAT GAAGCACAGG AACGTAGCGT TCGGGGAAGC CATCCGGTAT CTGGCGGAAA GATATCACAT CGCCCTCCCG GAACGCGACC ATGTTGAAGG CGCCACGCCG GGCGCGATTG AGAGTGCCCG GAAGGAACGC GAAGAGCTCT ACCGGATCCT CCGCTCGGCG GCGGATTTTT TTTATGACCA GCTGCATCAC AGCCCGGAGG GAAGGATCGC GAGGGAATAT ATTGCGCGGC GCGGCCTGCC GGCGGAGGTC GTCGAAACGG AGCGGATGGG ATTTGCTCCA CAGAGCTGGG ACAGCCTGTC CCGTCACCTG GCGAATCTCG GATATGATGT CGAACCGGGG ATCGGGGCGG GGCTGCTGGC CCGGAGCACC GGTAAGGACA GAGTCTATGA CCGGTTTCGC AACCGTCTCA TATTTCCCAT CCGGGACGAG GGAGGCCGGA TCGTGGCTTT CGGCGGTCGA AGCCTCTCCG CGGACCTCAA GGACGAGCCG AAGTACCTCA ACAGCCCCGA AACCGCCGTG TACCACAAGG GACGGTTGCT CTACCAACTG GCGAGAGCCC GCGAAGCATG CAGGCAGGTG CGGCAGACGG TCCTGGTGGA AGGCTACATG GACTTGCTGG CGTTCCACGC GCGAGGGTTC TTCCGCGTGG TCGCGACCCT GGGAACGGCC CTTACGCCTC ACCAGGTTCG GATATTGTCC CGGATGTCCG ACGAAGTCGT TATGGCCTAT GACGGAGACG AGGCGGGAGA CAAAGCGATG CTGAGAGGGC TGCCGCTTTT TCTGCAGGAG AACGTGGCGG TCAGTTGCGT GCGCTTTCCC GACGGTATGG ACCCCGACGA TTTCCTCAGG AGGGACGGGC TGGAAGGTTT CGAGAAACTG CTCCGAAGCA GGCAGGAACT GGGCGCTTAC GCCGTCAAGA GAATCCTTGA CGGCTGGGAT GGAAGCGCAA GCGCGAGGCT GAAAATCGCT GCCGAATTGA GGCCGATTTT CGACGCCGTG CGCCAACCCC TGCTGAAGTC CGAGTATCTG AGGCTGGCGG CCGACCGGCT CTGCGTCTCC GAAGAAGTGT TGAATCAGCA GTTGCGCCAC GACCGCCGCA CGCCGGAAAG ACCTTACTCC CGCTCCTACC GTACCCCCGT TCTTCCCGGA ATCTCCGAAA CGCAGACCCT CGAGGAAAAA ATCCTTCGAT TGCTCATCAG ATACCCCGAT CTCATCGAGC AAGCCGACAG CTCGGGCGCG CTGGAGTACT TCCAAGAACC GAAACTGCGT GCCCTGGCGA TGGTGCTCGT TGGAACACCT CACGCTCCGG AGAGCGAATT CAATGCCTCC ATCGTCTACG ACGAGCTTGC CGATCCGGAA TCCAAGGAGA TGTTCACACG GTTCATGCTT GAATCCGCGG AACTTGCGGA ACCGAGGGTG CAGCTTAACG ACTGGTTGAT CGCGCTGACG AGACGGGAGC TCAAACAGAG AAGCCTGGAC CTGGACACCG CCCTTAAGGC GGCCGTCCGG GAAGGCGACT CGGATCGGGT CAGACACATC CTGGTGGAGA TTCAGAACCT GAACTCCGCC AAGAAGAGGG ATAAAGATTT ACCGTACAAC CTGTAG
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Protein sequence | MATLVKQAVD IVDVVGQVVQ LRRSGNRHLG LCPFHQEKTP SFHVDAENQL YYCFGCGSGG DVLNFVMKHR NVAFGEAIRY LAERYHIALP ERDHVEGATP GAIESARKER EELYRILRSA ADFFYDQLHH SPEGRIAREY IARRGLPAEV VETERMGFAP QSWDSLSRHL ANLGYDVEPG IGAGLLARST GKDRVYDRFR NRLIFPIRDE GGRIVAFGGR SLSADLKDEP KYLNSPETAV YHKGRLLYQL ARAREACRQV RQTVLVEGYM DLLAFHARGF FRVVATLGTA LTPHQVRILS RMSDEVVMAY DGDEAGDKAM LRGLPLFLQE NVAVSCVRFP DGMDPDDFLR RDGLEGFEKL LRSRQELGAY AVKRILDGWD GSASARLKIA AELRPIFDAV RQPLLKSEYL RLAADRLCVS EEVLNQQLRH DRRTPERPYS RSYRTPVLPG ISETQTLEEK ILRLLIRYPD LIEQADSSGA LEYFQEPKLR ALAMVLVGTP HAPESEFNAS IVYDELADPE SKEMFTRFML ESAELAEPRV QLNDWLIALT RRELKQRSLD LDTALKAAVR EGDSDRVRHI LVEIQNLNSA KKRDKDLPYN L
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