Gene Sfum_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1190 
Symbol 
ID4460462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1472792 
End bp1473421 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content61% 
IMG OID639701957 
Productmethyltransferase type 11 
Protein accessionYP_845318 
Protein GI116748631 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0776895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGGA TGGAACCTGC CATGGACATG ACGTTCACTC CTGAAGACAG GAAACGGATC 
GAAGACGAAA TCGGTCGCAA ATACCGCAAA GTCGCCCTCA GCCCCGAGGG TTCCTTCAGG
TACCCCACCG GCCGCGCGGG GTTGGAGGGA CAGAACTATG ACCCCGAAAT CATCGAGGCG
CTGCCCGAGG ATGTTCTTGC CTCGTACTGC GGGGTCGGAA ACCCGTTTTC CCTGGGACGG
ATCCGCAAGG GGGAGCGTAT TCTGGACATA GGCTGCGGCG CCGGCGTGGA TGCGATCGTC
GCCGGAGTCA TGACCGGCCC CGCGGGGGCG GTTGTGGGCC TGGATCTCAC ACCCGAAATG
CTCGAGCGGG CCAGGCGGAA CCTGAGCAGG ACTTCACTCA AGAATGTGAG CTTTGTCGAA
GGTTCCGCGG AAAATCTGCC TTTCCCGGAA GCGAGCTTCG ACGTGGTCAT CTCGAACGGG
GCCTTTAATC TCGTGCCCGA CAAGCTGCAA GCGCTTCGGG AGGTGATCAG GGTGCTCAAG
CCCAACGGGC GTTTCATGAT GGCGGACCAG GTCCTGACAA CCGAACCGCC CTCCGATGCG
AAATCCATGG TCGAAACCTG GGCCGGGTGA
 
Protein sequence
MLRMEPAMDM TFTPEDRKRI EDEIGRKYRK VALSPEGSFR YPTGRAGLEG QNYDPEIIEA 
LPEDVLASYC GVGNPFSLGR IRKGERILDI GCGAGVDAIV AGVMTGPAGA VVGLDLTPEM
LERARRNLSR TSLKNVSFVE GSAENLPFPE ASFDVVISNG AFNLVPDKLQ ALREVIRVLK
PNGRFMMADQ VLTTEPPSDA KSMVETWAG