Gene Sfum_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1142 
Symbol 
ID4460220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1419455 
End bp1419916 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content60% 
IMG OID639701909 
ProductMarR family transcriptional regulator 
Protein accessionYP_845270 
Protein GI116748583 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGT CTGCTACGGA CACTCCGGAT CATGCCAGAT GTCTCGAAAT AGGGCGGACC 
TGCGCGTGTT ACAGCCTGCG GAAGGCCGCC CGCGCCGTCA CCCGGCTCTA TGATGATTTC
CTGAGGCCCT CCGGCCTCAG GGTCACCCAG TTTTCCGTGC TCATGACGGC CAGAATCCGC
GCCCCGATCA CGCTGACCCG GTTGGCTCAT CTCACGGTCA TGGATCGCAC CACCCTCACC
AGAAATCTCA AGGTCCTCGA AAAGAAGAAG CTCATCAAGA CCGAACCGGG AGAAGACCGC
AGAGAGCGTC AAGTACGCCT CACCGACCTG GGGGAGGAGA AGCTCGTTGA AGCCATACCC
CTGTGGGAGG AAGCCCAGTC CCGCATCACA AGCGGTCTGG GAGAGGAGCG CATGGATGGT
TTTCAAAGGG ATCTCCTGCG GGTTGTCTCC CTCGCCCGCT GA
 
Protein sequence
MKPSATDTPD HARCLEIGRT CACYSLRKAA RAVTRLYDDF LRPSGLRVTQ FSVLMTARIR 
APITLTRLAH LTVMDRTTLT RNLKVLEKKK LIKTEPGEDR RERQVRLTDL GEEKLVEAIP
LWEEAQSRIT SGLGEERMDG FQRDLLRVVS LAR