Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1121 |
Symbol | |
ID | 4457947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1396418 |
End bp | 1398064 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639701888 |
Product | AMP-binding domain protein |
Protein accession | YP_845249 |
Protein GI | 116748562 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.131488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGAAC TCGAGTTCAA GTCGTCCACT CTGGGACAGC TTCTCGACCG TGCGATAGAG AGATTTCCCG ACAATGAGGT CATCGTCTAC GAGGACCGCG ACTTCAGGCT CACGTATCGC GAATTCGGAG AATTGGTGGA CAAGGTGGCC AAGGGCCTCA TGGCGCTTGG GGTGAAAAAG GGCGAAAAGG TGGCCGTCTG GGCGACCAAC GTCCCTTACT GGGTTGTTTT GCAGTTCGCC ACGGCAAGAG TGGGAGCGGT GCTGCTGACG GTCAACACCG CGTACAAGAC CGCCGAGCTT GAATATCTGC TCAGACAGTC CGAGTGCGAG AACATTTTCA TCATCGACGG ATTCAGAGAC ACCGACTACG TTCTCACTCT CTACGATCTC CTCCCCGAGC TCAAGACTCA ACAGAGGGGA TACCTCAGCA GCTCGAGGTT CCCTCATCTA AAACGGGTCT TCTTCCTGGG CCATGAGAAG CACAGAGGAA TGTATTCCGT CGCCGAAGTG TTGGCGCTGA GCGTCATGAC CGATGACGAG CAGTACAGGG CCAGGCAGGA GGAACTCGAC GTGCACGACG TTGTCAACAT GCAGTATACG TCGGGAACCA CCGGTTTTCC GAAGGGCGTC ATGCTGACCC ATTTCAATCT CGTCAACAAC GGGTACTGGA TTGGGAAAAA CCAGCTCTTC GGCCCCGAGG ACCGCATCTG TCTCCCCGTT CCCCTGTTCC ACTGTTTCGG GTGTTCCCTC GGCGTCATGG CCGCCGTGAA TCACGGCTCC GCCCTGGTCA TTCTCGAGGG ATTCGATCCT GTTTCGGCCA TGACCGCGGT GGAGAAGGAG CGATGCACCG CGATCTACGG TGTTCCAACC ATGTTCATCG CGATCCTGGA CCACCCTCTT TTCCCCAAGT TCAGCTTCGC CTCCTTGAGG ACCGGCATCA TGGCGGGGTC CCCCTGCCCC GCCCCGATCA TGAACCGGGT CATCGAAAAG ATGAACGCAA GACAGATCAC CATCGTCTAC GGGCTCACGG AATCATCCCC GGGGATGACC CAGACCCGCG TGAACGACGA CATTCGCAAG CGCTGCGAAA CGGTCGGTCG CGCCATGCCG GGGGTTGAAG TGTGCATCAT GGATCCCGAG CTTCGCACCC CGGTTCCCCT TGGGGTACCG GGCGAAGTCT GCTGCCGGGG TTATATCGTG ATGAAGGGGT ATTACAACAT GCCCGAAGCC ACCATGCAGG CAATTGACCA ACAGGGCTGG CTGCATTCGG GCGACCTTGG CGTCATGGAC AAGGATGGGT ACGTGGCCAT CACGGGCAGG CACAAGGATA TGATCATTCG CGGCGGAGAA AACATCTACC CGAAAGAGGT CGAGGAATTT CTGTACGGGA TGGAAGGGAT TCGCGACGTC CAGGTGGTCG GAGTTCCGAG CGCGAAGTAT GGCGAGGAGG TGTGCGCCTT CGTCATCCTC AAGGACGGTT CTTCCTACTC GCCCCAGGAC GTGATCGACT TCTGCCGTGG CAAGATATCC CGATACAAGA TCCCGAAGTG CGTCGCCTTC GTGGACGGAT ACCCCATGAC CGCAAGCGGC AAGATCCAGA AATTCAAGCT GAGGGAGGAG GCGGCGCGAT TGTTTCCGGA CGCCTGA
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Protein sequence | MEELEFKSST LGQLLDRAIE RFPDNEVIVY EDRDFRLTYR EFGELVDKVA KGLMALGVKK GEKVAVWATN VPYWVVLQFA TARVGAVLLT VNTAYKTAEL EYLLRQSECE NIFIIDGFRD TDYVLTLYDL LPELKTQQRG YLSSSRFPHL KRVFFLGHEK HRGMYSVAEV LALSVMTDDE QYRARQEELD VHDVVNMQYT SGTTGFPKGV MLTHFNLVNN GYWIGKNQLF GPEDRICLPV PLFHCFGCSL GVMAAVNHGS ALVILEGFDP VSAMTAVEKE RCTAIYGVPT MFIAILDHPL FPKFSFASLR TGIMAGSPCP APIMNRVIEK MNARQITIVY GLTESSPGMT QTRVNDDIRK RCETVGRAMP GVEVCIMDPE LRTPVPLGVP GEVCCRGYIV MKGYYNMPEA TMQAIDQQGW LHSGDLGVMD KDGYVAITGR HKDMIIRGGE NIYPKEVEEF LYGMEGIRDV QVVGVPSAKY GEEVCAFVIL KDGSSYSPQD VIDFCRGKIS RYKIPKCVAF VDGYPMTASG KIQKFKLREE AARLFPDA
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