Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1119 |
Symbol | |
ID | 4457945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1390672 |
End bp | 1393419 |
Gene Length | 2748 bp |
Protein Length | 915 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639701886 |
Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
Protein accession | YP_845247 |
Protein GI | 116748560 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0474] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01517] plasma-membrane calcium-translocating P-type ATPase [TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0880814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAGGC TGATGGCAAA GCACTGGCAC CACATGCCGG GAGGGGAAGC GAGCGAGCTC CTTCAAACCA ACCCGGAGAG GGGCCTGGAA GAATTCGAAG CCAAACGCCG CCAGGAACAC TTCGGACCCA ACGTCATCAC CGGCAAAGGG GGAAAAGGCC CCCTCATGCG ATTCCTCCTG CAGCTTCATC AGCCCCTCAT CTATATCCTG ATCGCAGCCG GAGCGGTGAC GGCCGCCTTC CGGGAATGGG TCGACTCGGG CGTCATTTTC GGGGTGGTGC TGGTCAACGC CTCTATCGGT TTCCTCCAGG AGTCCAAGGC CTTGGCCGCC ATCGCCGCCC TCGCCCAGAC CATGGTGGCC GAAGTCACGG TGCTGAGAGG CGGCTCCAGG CGCCGGATCT CCTCCGCGGA GGTGGTGCCG GGCGACCTCA TCCTCCTTCA GTCGGGCGAC AAGGTCCCCG CCGACATGCG CCTGATCGAA TTGAAGGATC TGCAGATCGA TGAATCCACC CTTACCGGCG AATCGGTACC GGTCAAGAAG AAAAGAGGGG TTCTCGACCG TGACACCGTG CTGGCCGATC GCCGCAACAT GGTCTACGCC TCGACCCTGG TCACTTACGG CCAGGGAACC GGGGTGGTGG TCGCCACGGG CAACGCCACG GAAGTCGGGC GGATCTCCGA GCTCATTTCC GCGGCACCCG AGCTGCAGAC CCCGCTCACA AAAAAGATCG CCCACTTCAG CCACATTCTG CTTTACGCCA TCCTGGCGCT TGCCGCGGCC ACGGTGCTGA TCGGCGTTCT TCGAGGCCAA CCCGCTCTCG AGATGTTCAT GGCGGCAGTC GCGCTGGCCG TGGGAGCCAT CCCGGAAGGG CTTCCCGCGG CGTTGAGCAT CACGCTCGCC ATCGGCGTCG CGCGGATGGC CAGGCGACGG GCGGTCATCC GCCGCCTTCC CGCCGTGGAG ACCCTGGGCA GCACCACCGT CATCTGCACG GACAAAACAG GGACTTTGAC CGAGAACCAG ATGACCGTTC AGGAAATCTT CGCCGGCGAC GAAACCTTCG AAGTGTCGGG CGCGGGTTAC GACCCCTCGG GAACGGTCCT GAAGCAGGGC GAGCCCATCA CCCACGGTGG AACCCCGGTA CTGTTTGAGT GTTTGCGGGC GGGATTGCTC TGCAACGACA GCATCCTCGT GCAAAAGGAA GGCCGCTGGG GCGTGCAGGG AGATCCCACG GAAGGTGCCC TGATCGTCGT CGCCGCCAAG GTGGGCCTCT CGGCCGACGA AGAGGCGGCC CGGCTTCCGC GGCTCGACGT GATTCCCTTC GAATCGGAAC GCCAGTACAT GGCGACCTTG CATGATGCGG GGCAGGCCGA AACCCCGATC GCCTACGTCA AGGGGGCGGC CGAGATCATC CTGGAGCGGT GCACGGAATC TCTCGACGCG ACAGGAGCCG CTCAACCGGT GGACAGGGAA CGGGTGATGG CCGAGGTCGG GAGGATGGCT TCAAACGGTT TGCGCGTCCT GGCGTTTGCG AAAAAGGACA TCTCCCCGGA ATCGGCCCCG TTCGACCATG AGGACGTGGC CGGCGGCCTC CGTTTCCTGG GGCTGCAGGG GATGATCGAC CCGCCGCGGG CTGAGGCGAT AGAGGCCGTG AAAGCGTGTC ACACGGCAGG CATCCGCATC AAGATGATCA CCGGAGACCA TGCGATCACC GCGTCGGCGA TCGCCGAAAA GATCGGGCTG ATCGATGCCG GGGATTCTGC CCCGGCCGGG AAGGCGGCGA TAACCGGGAA AACCCTGGCG AAAATGCCGG ACGCGGAGCT CATCGAGGCG GCTGAAGAGA CACCGGTTTT CGCCAGGGTG GACCCCGAGC AGAAGCTGTC GCTCGTCGAA GCGCTCCAGG CAAGGGGGCA CATCGTCGCC ATGACCGGCG ACGGCGTGAA CGACGCGCCG GCGTTGAAGC GGGCCAACAT CGGCATCGCC ATGGGCATCA CCGGTACCGA GGTGGCCAAG GAAGCCGCCG ATATGATCCT CACCGACGAC AACTTCGCCA CCATCGAAGC CGCGGTTGAG GAAGGGCGGG GAGTCTTCGA CAACCTCACC AAATTCATCG TCTGGACGCT CCCCACGAAC CTGGGTGAAG GTCTCGTGAT TCTTTTGGCC ATCTTTGCCG GCGCGACGCT GCCGATCCTC CCCGTCCAGA TCCTGTGGAT CAACATGGTG ACCGCCGTCC TGCTGGGGCT GACCCTCGCT TTCGAGCCCA AAGAGCCCGG CATCATGCTG CGTCCCCCGC GCGATCCGAA GACGCCGATT CTCACACGCT ACCTTCTCTG GCGCATCATC CTCGTGGGCG GGATGCTCAC CGCCGCCGGT TTCGGCCTCT TCGAATGGGA GCTGCACCGG GGAGCGAGCG AGGCTCAAGC CCGCACCGTG GCGGTGAACG TCTTCGTGGT TGCCGAAATC TTCTACCTGC TCAACTGCCG GTCGCTGACC AAGTCCATGT TCCAGCTGGG CCTCTTCTCC AATCCGTGGC TCTTTGTCGG CGTCTCACTC ATGGTCCTCC TGCAGCTCCT CTACACCTAT CTGCCCGCCA TGAACTGGAT GTTTCACGGT GCCCCGATCC CCCTCGACGC CTGGGGATAT ATCCTTGCCA CGGGCCTGGC GGTCTACCTG GTGATCGGGT TTGAAAAATG GGTGCGACAG AGAACGAGCG GGGGCGGCAA GGAGCAAGCC GTCGGGAAAG CGCCTTGA
|
Protein sequence | MERLMAKHWH HMPGGEASEL LQTNPERGLE EFEAKRRQEH FGPNVITGKG GKGPLMRFLL QLHQPLIYIL IAAGAVTAAF REWVDSGVIF GVVLVNASIG FLQESKALAA IAALAQTMVA EVTVLRGGSR RRISSAEVVP GDLILLQSGD KVPADMRLIE LKDLQIDEST LTGESVPVKK KRGVLDRDTV LADRRNMVYA STLVTYGQGT GVVVATGNAT EVGRISELIS AAPELQTPLT KKIAHFSHIL LYAILALAAA TVLIGVLRGQ PALEMFMAAV ALAVGAIPEG LPAALSITLA IGVARMARRR AVIRRLPAVE TLGSTTVICT DKTGTLTENQ MTVQEIFAGD ETFEVSGAGY DPSGTVLKQG EPITHGGTPV LFECLRAGLL CNDSILVQKE GRWGVQGDPT EGALIVVAAK VGLSADEEAA RLPRLDVIPF ESERQYMATL HDAGQAETPI AYVKGAAEII LERCTESLDA TGAAQPVDRE RVMAEVGRMA SNGLRVLAFA KKDISPESAP FDHEDVAGGL RFLGLQGMID PPRAEAIEAV KACHTAGIRI KMITGDHAIT ASAIAEKIGL IDAGDSAPAG KAAITGKTLA KMPDAELIEA AEETPVFARV DPEQKLSLVE ALQARGHIVA MTGDGVNDAP ALKRANIGIA MGITGTEVAK EAADMILTDD NFATIEAAVE EGRGVFDNLT KFIVWTLPTN LGEGLVILLA IFAGATLPIL PVQILWINMV TAVLLGLTLA FEPKEPGIML RPPRDPKTPI LTRYLLWRII LVGGMLTAAG FGLFEWELHR GASEAQARTV AVNVFVVAEI FYLLNCRSLT KSMFQLGLFS NPWLFVGVSL MVLLQLLYTY LPAMNWMFHG APIPLDAWGY ILATGLAVYL VIGFEKWVRQ RTSGGGKEQA VGKAP
|
| |