Gene Sfum_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1116 
Symbol 
ID4461088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1388928 
End bp1389329 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content58% 
IMG OID639701883 
Productpyridoxamine 5'-phosphate oxidase-related, FMN-binding 
Protein accessionYP_845244 
Protein GI116748557 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.114511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACGA AGGAACTGAA AGAGTATTTC GAAAAGGCAT CGGGACACGG CATTCTCGCA 
ACCGCCGACG GCGACGGTCT TCTAAACCAG GCGGTCTTTT CCCGCCCCCA TTTCATGGCC
GACGGGACCG TTGCGTTCAT CATGCCCCAT AAGCTCACTC ACAGGAACCT CCAGGAAAAC
TCCCACGCCG CGTACCTGTT CATCGAGACA GGTTCCGGCT ACAAGGGAAA AAGAATCTAC
CTGACGAAAG TGAAGGAAGA GCAGGACACG GAACTGTTGA GGACTTTGCG CCGCCGGCCC
CATCCTTCGG ACAGGGGCGG TCAGGACGGA CCGAGGTTTC TCGTCTTTTT TCGAGTGGAC
ATGACCCTGC CGCTCATCGG TGCCGGCGGT TCGGCGGCCT GA
 
Protein sequence
MDTKELKEYF EKASGHGILA TADGDGLLNQ AVFSRPHFMA DGTVAFIMPH KLTHRNLQEN 
SHAAYLFIET GSGYKGKRIY LTKVKEEQDT ELLRTLRRRP HPSDRGGQDG PRFLVFFRVD
MTLPLIGAGG SAA