Gene Sfum_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1106 
Symbol 
ID4461075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1374300 
End bp1375394 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content66% 
IMG OID639701870 
Productglycosyl transferase, group 1 
Protein accessionYP_845234 
Protein GI116748547 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.525955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTCG CGCATACGGA GAGCTCGATC AACCTCGGGG GCCAGGAGCT TCGGATCCTC 
GAACAGATCC GTTGGGCGCG CGATCGCGGG CATGAATTCT GGCTCCTGGC CAGGGAGGAA
TCCGCCGTCT ACCGGGAAGC AGCCCGGCGG AACCTGCCGC GCCAGGTGGT TCCATTTCGA
GGGTCCCTCA GCCCGATAGC CGTCCTCTCG CTCATACGTT TCGCAAAACG GCGCCGCATC
GACGTCATCG ACTGCCACAG CTCGCGGGAT GCAAGCACGG CCATGGCGGC CCGGCTGCTC
TCCATCCCGG TGGTTCGCAC TCAACACGTC TGCGTCGCCC TCCGGGACGA CCTCCCGCAC
CGGCTGACCT GGCGGCTGGG ATCGGACCGG ATCATCGCCG CATCGGGCAG CATCGCCGAC
CGGATCGTCA ACCAGGGTCT GGGAAAACGT TCCCGAATAC GCGTGGTCGG CGACGGCATC
GACCTCGGGC AATTCCATCC CGGTGTGGAC GGGCAGGCGG TCCGGGACGA ATTCGGCCTC
CCTCCATCCG CCCGACCGGT CACGCTCATC GGCATGATCC GGCCGGACAA GGGCCAGCAT
TACCTGGTCA GGGCCGTGGA CGACATCGTC GCCCGGATTC CCGACGCCTG GTTTTTCATC
GTGGGATCGG CGACCCGTCC GGAGTTCCTT GCCCGACTCG ACGCCGAAAT CCGGGGCGTC
CGGCACCGCG ACCGGATCGT CCTCACGGGG TTCCGGGAAG ACGTGGAGCG GTTCATCGCC
GCGAGCGACG TCATCGTGCT GACTTCCGAG ATCGAGGCGC GGTCCCGGGT CATCCCGCAG
GCGTTCGCGA TGAAAAAGCC CGTGGTGGCG AGCCGCGTGG GCGGGATACC GGAGCTCGTC
GAGGATGGCC GCACCGGCTT CCTGTATCCG TGCGCAGATG TCCGGAAGCT GGCTGAAACG
GTCGTCGGGG TGCTCGATGA TTTGCCCCGG GCCCAGGTGG AAAATGCCTA CGCACTGGCC
GTCAGGGACT TGTCCTTCGA GACGATGATG GCGGAGACGC TCGAGGTCTA TCGGGAGGTC
GCCGGGAGCA GGTGA
 
Protein sequence
MRVAHTESSI NLGGQELRIL EQIRWARDRG HEFWLLAREE SAVYREAARR NLPRQVVPFR 
GSLSPIAVLS LIRFAKRRRI DVIDCHSSRD ASTAMAARLL SIPVVRTQHV CVALRDDLPH
RLTWRLGSDR IIAASGSIAD RIVNQGLGKR SRIRVVGDGI DLGQFHPGVD GQAVRDEFGL
PPSARPVTLI GMIRPDKGQH YLVRAVDDIV ARIPDAWFFI VGSATRPEFL ARLDAEIRGV
RHRDRIVLTG FREDVERFIA ASDVIVLTSE IEARSRVIPQ AFAMKKPVVA SRVGGIPELV
EDGRTGFLYP CADVRKLAET VVGVLDDLPR AQVENAYALA VRDLSFETMM AETLEVYREV
AGSR