| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1084 |
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| Symbol | |
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| ID | 4460849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1339029 |
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| End bp | 1340318 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639701849 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_845213 |
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| Protein GI | 116748526 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGAAG AATCGAACGA TAAACCCGAT ATTGCCGAAA CCCTGGGGAT CGATCGAGCC
TCCGGCGACG GAAAGAGCGG AAAGCGATGG TTTGTTGTGG GGATCCTGGC CGTGTTGGCT
GTCGGAACGG CGCTTGTCGT CTGGAAAGGG TCGGGTTCGT CCGACGGCGT GCGTTACAGG
ACCCAGGAAG CGCAACGTGG AGATCTGACG GTCATCGTCA CGGCCACGGG GACTCTGCAG
GCAACCAACC AGGTGGACGT GAGCAGTGAG CTTTCCGGCA TCATCAAGAC GGTTGAAGCG
GATTACAACA GCAAGGTGAA AGTCGGACAG CCCCTGGCGA AACTGGACAC ATCGAAACTC
GAGGCGCAGG TGACGCAATC GAAAGCCGCT CTGGAATCGG CCAAAGCAAA GGTATTGCTG
GCGGAGGCAA CGGTCAGGGA AACGCGCAGC AAGCTGACGC AACTGCGGAA GGTGAGGGCG
CTGAGCGACA ACAAGGTCCC CTCTCAAACG GAAATCGATG CGGCGGAGGC CGCGCTCGAC
AGGGCACTGG CCGACGTTGC CAGTGCAAAG GCGACGGTTT CCCAGGCCCA GGCCACGCTC
GATGCCAACC AGACGGATCT GTCCAAGGCC GTTATCCGGT CGCCGGTCAA CGGCATTGTT
CTCACTCGCA GCGCGGAGCC CGGCCAGACC GTGGCCGCGA CGCTCAATCC CCCGGTGCTG
TTCACTCTGG CCGAGGATTT GACCAAGATG GAACTGGTCG TGAACGTGGA CGAGGCCGAC
GTGGGTCATA TCCGGGAGGG CCAGCAGGCC ACCTTCAGCG TTGCCGCCTA TCCGAACCGA
ACCTTCGAGG CTCAAATCGT CCAGGCCCGT TTCGGTTCAA AAACGACCTC GGGGGTCGTG
ACCTATGAAA CCGTGTTGAA GGTCGACAAC GTGGACCTGG CTCTGCGGCC GGGCATGACG
GCAACCGCGG ACATCATCGT CAAGAGGATC GAAAATGCCG TTCTGGTACC CAGCGCGGCG
CTGCGCTTCG TCCCTCCGGT CCGGGAAGAA AAGAAAGCTC CCACGGGGCT GCTCGCCAGG
ATCCTCCCGC GACCGCCCGG TTCCGGAACG CAACGACGGG AGGACCCCGC CGGCAGGAAG
GAGCATCGGG TCTGGACGTT GAAGGATGAG CAGCTTGTAG CGATCCCCGT CAAGATCGGG
GCGACGGACG GCAGTATGAC CGAAGTCGCA GCCGGTGAGA TCCAACCCGG AATGGCGGTG
GTGGTGGATA CCGCCGGTTC GGTGGAATGA
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| Protein sequence | MREESNDKPD IAETLGIDRA SGDGKSGKRW FVVGILAVLA VGTALVVWKG SGSSDGVRYR
TQEAQRGDLT VIVTATGTLQ ATNQVDVSSE LSGIIKTVEA DYNSKVKVGQ PLAKLDTSKL
EAQVTQSKAA LESAKAKVLL AEATVRETRS KLTQLRKVRA LSDNKVPSQT EIDAAEAALD
RALADVASAK ATVSQAQATL DANQTDLSKA VIRSPVNGIV LTRSAEPGQT VAATLNPPVL
FTLAEDLTKM ELVVNVDEAD VGHIREGQQA TFSVAAYPNR TFEAQIVQAR FGSKTTSGVV
TYETVLKVDN VDLALRPGMT ATADIIVKRI ENAVLVPSAA LRFVPPVREE KKAPTGLLAR
ILPRPPGSGT QRREDPAGRK EHRVWTLKDE QLVAIPVKIG ATDGSMTEVA AGEIQPGMAV
VVDTAGSVE
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