| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1074 |
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| Symbol | |
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| ID | 4460839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1322316 |
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| End bp | 1323533 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639701839 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_845203 |
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| Protein GI | 116748516 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.151684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.62301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTGCGGAA GCCGTTCATG GCAACGGTTC CTGCTCGCCG CTCTTTGCGT CATGACATTC
ATTCCGTCCG GCTGCGAAAA GCATGAGTCG ACCCGCTCCG ACCAACGCCC GGTGGAGGTG
ACGGCGGTCA CCGTGACCCC CCGGGACGTG CCGCTCACCT ACGAGTTCAT CGCCCAGGTG
CAAAGCTCCC AGCAGGTAAA CATCCAGGCC CGTGTCAGCG GGTTCCTGGA CAAGAGGGTT
TACACTGAAG GATCGATGGT CAAGGAGGGA CAGACCCTCT TTCTGATGGA CCAGAAACCC
TTCAAGGCAC AGCTCGATCA GGCCCGGGCC GCGCTCGCCA AGCACGAGGC CGCCCTCGAG
GTGGCGCGCC TGAACCTGGC CCGCGTCAAG CCGCTGACCG CTTTGAACGC ACTGTCCCAA
AAGGATCTGG ACGATGCGAT CGGCCAGTTC CAGTCCGCCG CGGCAGCGGT GGAGGGGGCA
AAAGCCCAGG TGGAGCAGGC GAAGCTCAAT CTTTCCTACA CGGTGATCAC TTCTCCCGTG
ACCGGTATCT CGAGCTATGC CCAGCAGGCC GACGGGACCT ATCTTCATTC CTCCAACAGC
CAGCTCACCA CCGTGGCGGT CATCTCGCCG ACTTACATCA ACTTCAGCAT TTCCGAAAAC
GATTGGCTGA AATACAGGGA TCAGGTTGCC AAGGGAAACG TGGTCGAACC CGACGACAAG
GTTTTTCTTG CCGAGGCGGT TCTCGCCGAC GGCGCGGTAT ACCCCCACAC CGGGAAGGTC
ACTTTCGCCG ATCCTTCCTT CAACCCCCGG ACGGGCACGT TCCTGATCCG CGCCACGGTG
GACAACCCCG ACGGCCGGTT GCGGCCGAAC CAGTATGTGC GCGTACGCTT GAAAGGGGCG
GTGCGGCGCA ATGCCGTTCT TGTGCCCCAA CGCGCGGTCC AGCAGACTTC CAAGGGGCAC
ACGGTCTGGG TTGTCGGCAA GGACGGCAAG GCGGAGCCCC GTCCCGTAAC GGTCGGGCAG
TGGCACGAGA ACGACTGGTT CATCAACGAG GGATTGCATG GAGGCGATCA GGTGGTGGTC
GACGGCGTCC TTCTCGTTCG TCCCGGCTCT TTGCTGAAAG TGTCGCCATT GTCCGACAAA
ACGAAGCCGG ACGGCGGAGG CCCGGCTGCG AACGATCCCG AAAAGAGCGC AAGCCGGGAA
GCAACCGGGA AACGATAG
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| Protein sequence | MCGSRSWQRF LLAALCVMTF IPSGCEKHES TRSDQRPVEV TAVTVTPRDV PLTYEFIAQV
QSSQQVNIQA RVSGFLDKRV YTEGSMVKEG QTLFLMDQKP FKAQLDQARA ALAKHEAALE
VARLNLARVK PLTALNALSQ KDLDDAIGQF QSAAAAVEGA KAQVEQAKLN LSYTVITSPV
TGISSYAQQA DGTYLHSSNS QLTTVAVISP TYINFSISEN DWLKYRDQVA KGNVVEPDDK
VFLAEAVLAD GAVYPHTGKV TFADPSFNPR TGTFLIRATV DNPDGRLRPN QYVRVRLKGA
VRRNAVLVPQ RAVQQTSKGH TVWVVGKDGK AEPRPVTVGQ WHENDWFINE GLHGGDQVVV
DGVLLVRPGS LLKVSPLSDK TKPDGGGPAA NDPEKSASRE ATGKR
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