Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1025 |
Symbol | |
ID | 4460927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 1263022 |
End bp | 1263564 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639701788 |
Product | pyruvoyl-dependent arginine decarboxylase |
Protein accession | YP_845154 |
Protein GI | 116748467 |
COG category | [S] Function unknown |
COG ID | [COG1945] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00286] arginine decarboxylase, pyruvoyl-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0470482 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTCC CGACAATGGC TTTTTTCACC AAGGGCGTGG GTTTCCACAA GAACGAGCTT CAGTCGTATG AGTTGGCGCT ACGGGACGCC GGGATCGAGA AACAGAACCT GGTGAGCGTT TCGAGCATTC TACCGCCCAA TTGCGAAATC ATCGATCTCG AGGAGGGCTT GAAGCTGCTC AAGCCCGGGC AGATCACGTA CTGCGTCATG GCCAGGCTCA GTGCCAACGA GTTCGGGAGG ATGATCGGGG CATCCGTCGG CATCGCCTTT CCCACCGACA GGAACCAGTA CGGGTACATC AGCGAGTTCC ACACCTTCGG GCAGGAGGAA ATCGAAGTCG GAGATTTCGC CGAGGATCTG GCCTCCACCA TGCTGGCCAC GACACTCGGA ATCGAATTCG ATCCGGACAA GGACTACGAT GAGCGAAGAG AGATCTACCT GATGAGCGGA AAGGTGGTCG AAGCCCTGTC TCTTCCCTGC GTGGCCTGCG GCATGAAGGG GGGTTACGTG ACCGTGATCT CCTGCGTCGT GTTCATTGAA TAG
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Protein sequence | MIVPTMAFFT KGVGFHKNEL QSYELALRDA GIEKQNLVSV SSILPPNCEI IDLEEGLKLL KPGQITYCVM ARLSANEFGR MIGASVGIAF PTDRNQYGYI SEFHTFGQEE IEVGDFAEDL ASTMLATTLG IEFDPDKDYD ERREIYLMSG KVVEALSLPC VACGMKGGYV TVISCVVFIE
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