Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1019 |
Symbol | nifH |
ID | 4460955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 1254398 |
End bp | 1255222 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639701782 |
Product | nitrogenase reductase |
Protein accession | YP_845148 |
Protein GI | 116748461 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.855562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.490785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAAA TTGCAATTTA CGGCAAGGGG GGCATCGGAA AGTCGACGAC GACTCAGAAC ACCGTGGCGG GTCTGGCGGA GATGGGACGG AAGGTCATGG TCGTGGGCTG CGATCCCAAA GCGGATTCAA CAAGGTTGCT GCTCGGGGGG CTGTCTCAGA AGACAGTCCT CGACACTTTG AGGACCGAAG GCGAGGACGT GGAGTTGGAC GACATCCGCA AGGTGGGGTT CAGCAAATCC ATCTGCGTGG AATCGGGAGG GCCGGAACCG GGCGTGGGCT GCGCCGGACG TGGGATCATC ACTTCGATCA ACCTGCTCGA ACAGCTCGGG GCCTACGCCT CGACCCAGGC CCTCGACTAC GTGTTTTACG ATGTTCTGGG CGACGTGGTG TGCGGCGGTT TCGCAATGCC CATTCGGGAA GGCAAGGCCC GCGAGATCTA CATCGTGGTC TCGGGCGAGA TGATGGCCAT GTACGCGGCG AACAACATCT GCAAAGGCAT CGTCAAGTTT GCCGAGGCGG GGGGCGTGAG GTTGGGCGGG CTGATCTGCA ACAGCAGGAA GGTGGACAAT GAGAAGGAGA TGATCGAAGC CTTCGCCAGA CAGTTGGGGA CGCAGATGAT CCATTTCGTG CCGAGGGATA ACATGGTCCA GAGGGCCGAG ATCAATCGCA AGACGGTGAT CGAGTTCGAT CCCGCCCATT CGCAGGCGGA TGAGTATCGG AGCCTGGCCC GTAAGATTGA GGACAACGAC ATGCACGTCA TCCCGAAACC CATGCACACG GATCATCTTG AGAAGTTGCT CATTGAACAC GGGCTGGCGG CCTGA
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Protein sequence | MRKIAIYGKG GIGKSTTTQN TVAGLAEMGR KVMVVGCDPK ADSTRLLLGG LSQKTVLDTL RTEGEDVELD DIRKVGFSKS ICVESGGPEP GVGCAGRGII TSINLLEQLG AYASTQALDY VFYDVLGDVV CGGFAMPIRE GKAREIYIVV SGEMMAMYAA NNICKGIVKF AEAGGVRLGG LICNSRKVDN EKEMIEAFAR QLGTQMIHFV PRDNMVQRAE INRKTVIEFD PAHSQADEYR SLARKIEDND MHVIPKPMHT DHLEKLLIEH GLAA
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