Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0952 |
Symbol | |
ID | 4460262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1169895 |
End bp | 1171355 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639701715 |
Product | fibronectin, type III domain-containing protein |
Protein accession | YP_845083 |
Protein GI | 116748396 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAA GAAAACCCTT GCCCGGCCCC ACAACGAAAT TCCGGCGCAT CCGCCGTTTG ACGACTTTCC TGGTTGCCCT CGCGGCCGCC CTCTCGATCG CTCCCGATGT CTTTCCCGCG TCAGTCACCC TGTCCTGGAA TCCCGTGTCG TTCAAGAACC TTCGCGGCTA CAAAATCTAT TGCGGCACAT CGCACCGCAA CTATTCCCGA CGCGTGACGC TGGGCAAAGC GACTTCCGGG ACGGTAAGGA ACCTTGTGAA GGGCAGAACC TATTATTTTG CCGTAACCTC CTATGCCGCC GGGGTGGAGA GCGGATTCTC AAAAGAAGTG GTCTTCCCCC CGAATGAGGC ACCGATCCAC GATAAGCGCC TCCAGACGGG TGATTCCGGG GATACGCCCG ACACCCCGGC ATCCGAGGGC GCATTCGAGC TGCAAGTCTT GTCCGGAACC GATCCCCCGG CTCCCGGCGT CAACGACGCG GGAGGCGATT CCGTTGCGGC GCCCGATTTT GGCGGCATCC AACCGCACGA ATCGGTTTAC CTGGAGGCGG AAGCCGGCGC TCTGGAGGTC CCCCTGGAAA CGGGCGTGAC CACGTCCGGC ACCGGTTTTA TCCGGGTGCC CTTAGGGCGG GAGCCCGTTT CGGACCCCCT GCGGGAAGGG GGCACCGCCA CCTATGCATT CACGGTGACC GCCGCCGGAG ACTATACCTT CTGGGGACGC GAATACTGTC CGTACAGCAC CCGCAATTCC TTTTTCGTCT CGGTCGATTC CGGCCCTTTC CTCACCTGGA ACACCGCGAT CGTCAACGGG TGGCTGTGGG ACCAGGTGCG CGACGGGTCC TCCGGTTCCC CGTTGAAACT GCGGCTGAGG GCCGGCGACC ATACGCTCAG GATCAAGCAA AAAGAGGACG GCACGCGCTT GGACAAGATC CTGATCACCA GCGTGCCGCA GCCGTTCCCC TCAACGCTCT ATTGCGCGGT ATCGCGCGGA GTGCCGGGCC GATGGAGCAT CACCGACTCC GACCCGCCCG GGGCGAAGGT CTTGAGCGTG TTTGACGACG AGCGGGGCGG TCCCGTCACG GAATTGTCCG GCTCCGAAAC GGCCAACGCG TTTCGCCTGG GCGGCCGGGA CCTCGACGGT TGGCACAACA CCCGTCAGTT CGTCCTGGAG TGGAGCATGA AGTTCTCCGA GGACTACGTG GTTTCGGTAC ACCTGCAGAC CACGGACGGC TACCGGGAAA TCCGGTACAA GCCTCTTGTC GGAAACGGTC CGGGAGACGA CCGGACAATC GATTGCGGGC TTGGGCCCGG CACCCTGGAC GGCGACTGGC ACACCTTCGC CCGCCACCTG CAAAAGGACT TGTCCAGGGC ACAGCCGGGG GTAAAAATCC TCGAAGTGAA TGGATTCTCG GTTCGCGGCA GCGGCAGAAT AGATAACGTG AGGCTCGGGG CCGGCCGTTG A
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Protein sequence | MAERKPLPGP TTKFRRIRRL TTFLVALAAA LSIAPDVFPA SVTLSWNPVS FKNLRGYKIY CGTSHRNYSR RVTLGKATSG TVRNLVKGRT YYFAVTSYAA GVESGFSKEV VFPPNEAPIH DKRLQTGDSG DTPDTPASEG AFELQVLSGT DPPAPGVNDA GGDSVAAPDF GGIQPHESVY LEAEAGALEV PLETGVTTSG TGFIRVPLGR EPVSDPLREG GTATYAFTVT AAGDYTFWGR EYCPYSTRNS FFVSVDSGPF LTWNTAIVNG WLWDQVRDGS SGSPLKLRLR AGDHTLRIKQ KEDGTRLDKI LITSVPQPFP STLYCAVSRG VPGRWSITDS DPPGAKVLSV FDDERGGPVT ELSGSETANA FRLGGRDLDG WHNTRQFVLE WSMKFSEDYV VSVHLQTTDG YREIRYKPLV GNGPGDDRTI DCGLGPGTLD GDWHTFARHL QKDLSRAQPG VKILEVNGFS VRGSGRIDNV RLGAGR
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