Gene Sfum_0926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0926 
Symbol 
ID4460341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1138424 
End bp1139341 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content60% 
IMG OID639701689 
Producthypothetical protein 
Protein accessionYP_845057 
Protein GI116748370 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTATC TCAAACTGAT TTGCACCGCC GTTTTCTGGG GAGGCACCTT CGTTGCCGCG 
CGGATCGCGG CCAGGGAAAT GGAACCCTTT TCCGCCGCTT TCCTGCGGTT TGTCACGGCA
TCGGTGTTTC TGTTCGGATT CGTGTTCAAA TCCCACGGCA AAATCCCCCC ATTGGATCGA
AGACATTTCC CTTTCGTGCT CCTCCTCGGC CTGACCGGCG TTTTTGCCTA CAACGCATGT
TTCTTCGCCG GTCTGAAAAC GATCACCGCA AGCCGGGCTT CTCTCATCAT CGCCACCCAG
CCCGCTTTCA TCGCGTTGCT GTCGTCCTGG TTCTTTCGCG AAAAGCTCGA TTCCCTCAAA
ATCCCCGGCA TCATGCTGTC CATTGCCGGC GCGGTGACCG TCATCTCCCG CGGCCATCCG
CTCACCCTTT TCAGCAACAG CATAGGACCC GGGGAAGCGT ATATCCTGGG CTGCATCGCC
AGTTGGGTGT CCTACACCCT GATCGGCAAA GCCGCCATGA AAAGCCTCTC TCCCCTGACG
GCCGTAACGT GGTCCTGCGG CGTCGGGGCG GTCTGCCTGC TGCCGTTCGC ATTGGCCGAA
GGAATTCTGC GGAGCATCGG GGAATTTTCC CTCACGGCCT GGGTCGGCAT CCTGTACCTG
GGCTTTTTCG GCTCCGCCCT CGGTTTTTTC TGGTACTATG AAGGCATCAA GGCCATCGGG
GCGGCGCGGG CGGGGATCTT CATCAACCTC GTCCCGGTGA GCTCGATCGT GCTCGCCTGC
CTGATACTCG ATGAAACCCT GGATGCATCC CTGGCCGCCG GTGCCGTCCT GGTCGTTTCC
GGCGTCTACC TGACCAACCG TTCCCCCCTG TTTCGTTCCC CACCGATTTC CGCTGTCGAT
TCCTCCCGGC GGCGATGA
 
Protein sequence
MLYLKLICTA VFWGGTFVAA RIAAREMEPF SAAFLRFVTA SVFLFGFVFK SHGKIPPLDR 
RHFPFVLLLG LTGVFAYNAC FFAGLKTITA SRASLIIATQ PAFIALLSSW FFREKLDSLK
IPGIMLSIAG AVTVISRGHP LTLFSNSIGP GEAYILGCIA SWVSYTLIGK AAMKSLSPLT
AVTWSCGVGA VCLLPFALAE GILRSIGEFS LTAWVGILYL GFFGSALGFF WYYEGIKAIG
AARAGIFINL VPVSSIVLAC LILDETLDAS LAAGAVLVVS GVYLTNRSPL FRSPPISAVD
SSRRR