Gene Sfum_0918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0918 
Symbol 
ID4460315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1130345 
End bp1131160 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content58% 
IMG OID639701681 
Producthypothetical protein 
Protein accessionYP_845049 
Protein GI116748362 
COG category[R] General function prediction only 
COG ID[COG1073] Hydrolases of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGTCT TTGCGGGATT CGTTCTGCTC TATGGTGTCC TGGCCGGGCT CATGTTTGTT 
TTTCAATCGC ACCTCGTCTA TTTCCCGGAC AAGGAAATGA CGTGCTCGCC TCACGACGTG
AACCTGCCGT ACGAGGCGGT GTTTTTCCAT ACGCGGGACC GGATCGAGAT CGCGGCATGG
TTCGTGCCGG CCGAACAATC CCGGGGCGTT GTACTCATCT GTCATGGGAA CGGCGGCAAC
ATCTCGCACC GCATGCCGCT GATCCGGATT CTCAACGATC TTTCACTTTC CTGCTTGATT
TTTGACTATC GCGGGTATGG GAACAGCGCG GGCAAGCCTA CGGAGGAAGG CACCTACCGG
GACGCCGAGG CGGCCTGGCA CTACCTGGTC GATACACGGG GCATCGATGC CCGAAATATC
GTGATCCTGG GGAAATCCCT GGGAGGGGCC GTCGCTGCCC GGCTCGCCAG GGAGCACACC
CCCGCAGCGC TGATCGTGCA ATCGACGTTC ACGTCTCTCA CGGAGCTCGG CCAGACGGTG
TACCCGTTCT TGCCGGTGAG ACTCCTGTCG AGATTCAACT ACGGCACGGC GGAGTATTTG
CGCGGTGTGA ACTGCCCCGT GTTGATCATG CACAGCCGTC AAGATGAAAT CGTTCCCTAC
AGCCACGGGT GCGAGCTTTT CAGAGTCGCC GGACAGCCGA AGGAGTTCGT CGAAATGGAA
GGCGACCACA ACAGCGGTTT CATTGTGTCC GAATCACGAT TCCGGGAAGG AATTTCAGGT
TTCCTACGGC AACATCTGCC TGGATGGCCG CGTTAG
 
Protein sequence
MHVFAGFVLL YGVLAGLMFV FQSHLVYFPD KEMTCSPHDV NLPYEAVFFH TRDRIEIAAW 
FVPAEQSRGV VLICHGNGGN ISHRMPLIRI LNDLSLSCLI FDYRGYGNSA GKPTEEGTYR
DAEAAWHYLV DTRGIDARNI VILGKSLGGA VAARLAREHT PAALIVQSTF TSLTELGQTV
YPFLPVRLLS RFNYGTAEYL RGVNCPVLIM HSRQDEIVPY SHGCELFRVA GQPKEFVEME
GDHNSGFIVS ESRFREGISG FLRQHLPGWP R