| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0907 |
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| Symbol | |
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| ID | 4460304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1118157 |
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| End bp | 1119764 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639701670 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_845038 |
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| Protein GI | 116748351 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTCTG GCGCGGTGCT CCTGAACAAG GTTCTTGAAA GAAGGCTTCG AAGGGCGGAC
ATCAGGCTTA TTCTCGACAC ATTGTGCCGT GATGACCAGG ATACTTTCCT CGATGAATTG
TCGGACGTTC TCAGAAAGCT GATTACCCTC ACCGAGGTGT CGACCCGGCT GAGCGAATCT
CTTTCCCTGG ACGTCCTGCT CTCCCGTCTG ATCGAGATCA CGACAGAATC CCTGGAAGCC
TACCGGGGAA CCGTTTTCCT ACATGACAAA GACACCAACG AGCTGTACTC GCGCGCGGCC
CTGGGCAATC TCATCCAGGA GATTCGCATT CCGATCCATC AGGGCATCGT CGGGAACGTC
TTTGTCACGG GACAGCCGGT CAACATCGAC GACGCCTACG CCGATGCGCG TTTCAACCCC
GAGATGGACA AGAAGACCGG GTACAAGACG CGAAACGTGC TTGCGGTGCC CATCAAGACC
AAAGACCGCC AGATTGTCGG TGTGATTCAG CTCCTCAACA AGAAATCGGG GAGCTTTTCC
GAAAACGACC TGTTGATGCT CGAGGCCATC GGCGGCCAGG CCGCCGCCGC CCTTCAGAAC
GCGCAGACGT ATGAAATAGT GTCCCGCACC CGGCACGAAG AATCCATGCT GTTTCAACAG
GTGGGAAAGG AGAGGCGCGA AGAGGCTCAG TTCTTCAAGT TCACCAGGGA GATTTTTTTT
GAGCTCCGCA TGGAATCCCT CTTCAAGAAG ATCACCGAAA CCACCGCGAC CCTCCTCGCG
GCGGAAAGGA GCGTCCTCTA CCTCCACGAC GACAAGGCCA ACGAACTCTG GTCCATGACA
ACCCACGAAT CCCAGACCGT GAGAGTGAGA TTTCCAAGCC ACCTGGGGAT TGCCGGAAGC
GCTCTGATAA CCGGCGAGAT CGTGAATATC CCCGACACGG CAAAGCTGCC TTCTTCCATC
TTCCCGGTGG ACATCGAACC CGGCTTCCCC GCCCACTCCG TGCTCTGTGC GCCCATCAAG
ACGTCACAGG GAAAGGTTGT CGGCGTGATC CAGGTGAGAA ACAAGAAAGG CGGCCCATTT
GACCGGGCCG ACGAAAGCCG GCTCGAAATC TTTGCCGGGT ACGCCTCCAT TGCTATCAGG
AATGCCGAGC TCTTCGAGGC GACACTCAAG TCCGCGAACT ATTTCGAGTC GATCTTCAGG
ACCCTTCCCA ATGGTCTATT GCTCATGAAC GCCAACCGGA CCATCGAGGA CTGCAACGAC
GCCGCCTCGG AGATACTCGA CCTTCCGAAG GACCGGATCG TCGGCAGCCA GGTTGGGGAC
ATCTTCCTGG GAGACAGCAA GTGCGTGACG AACGCCGTCG AACGCGTCGT GCAGTCGGCC
AAACCCGAAG TGGGGATGTA CGCGAGGCTC AATCTGCTCG AGGGCAGGGT TGTCACGTTG
AACCTCAGCG TGCTGCCGAT CCTTGCGGAT CATGATCGTA TCGCAGGGGC CATCCTCGCT
CTCGACCCTC TCGTCACCAG AGGAACCTAC CGGACGCTCC AGGGCTATCG GAACCAGAAT
CCCCCGGCCT ACATTCCCAT CAACAGCGTT ATTTCCACCG GCAGTTAG
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| Protein sequence | MGSGAVLLNK VLERRLRRAD IRLILDTLCR DDQDTFLDEL SDVLRKLITL TEVSTRLSES
LSLDVLLSRL IEITTESLEA YRGTVFLHDK DTNELYSRAA LGNLIQEIRI PIHQGIVGNV
FVTGQPVNID DAYADARFNP EMDKKTGYKT RNVLAVPIKT KDRQIVGVIQ LLNKKSGSFS
ENDLLMLEAI GGQAAAALQN AQTYEIVSRT RHEESMLFQQ VGKERREEAQ FFKFTREIFF
ELRMESLFKK ITETTATLLA AERSVLYLHD DKANELWSMT THESQTVRVR FPSHLGIAGS
ALITGEIVNI PDTAKLPSSI FPVDIEPGFP AHSVLCAPIK TSQGKVVGVI QVRNKKGGPF
DRADESRLEI FAGYASIAIR NAELFEATLK SANYFESIFR TLPNGLLLMN ANRTIEDCND
AASEILDLPK DRIVGSQVGD IFLGDSKCVT NAVERVVQSA KPEVGMYARL NLLEGRVVTL
NLSVLPILAD HDRIAGAILA LDPLVTRGTY RTLQGYRNQN PPAYIPINSV ISTGS
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