Gene Sfum_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0879 
Symbol 
ID4460503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1084556 
End bp1085701 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content61% 
IMG OID639701642 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_845011 
Protein GI116748324 
COG category[R] General function prediction only 
COG ID[COG2768] Uncharacterized Fe-S center protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGTC GGGTCTACTA CACCGATCTC AGGGCCGGCA ACGACCAGAG CCTCTTGGAC 
AAAATCCGGA ACCTGGCCGA GTCGGCGGGC ATTCAGAAAG TGGTCAGGAA GAGAGGCCTG
ACGGCCGTGA AAATCCACTT CGGAGAACGC GGCAATACGG CTTTCATCCG CCCGCTGCTG
GTGCGCCCGG TCATCGACTC CATCGTCCGG GCCGGAGGAA AGCCGTTTCT TACGGATGCC
AACACGCTCT ATGTCGGGAC GCGGGGGAAT GCGGTGGATC ATCTCACCAC CGCCGTTCTC
AATGGGTTCG CCTACGCGGT GGTCGGGGCT CCTCTCATCG TGGCCGATGG AATCGACGGG
AAGGATGACG TGACCGTGCC GCTGAACTTC AAACACTGCA AGGAAGCGTT CGTGGGAACC
GCCATTGCAA GGGCCGATTC CATCATTTCC CTGGCTCACT TCAAGCTGCA CGAAGCGACG
GGCTTCGGTG GAGCGATCAA GAACGTCGGC ATGGGCTCGG CGTCGCGCCG GGGTAAAATG
GCTCAGCATT CCGAGGTGTC TCCGCAGCTG ATTCTCAAGA ATTGCATCGG CTGCGGCGTG
TGCCGGGACC AGTGCGCCCA CGAGGCGATC GAGCTGGTGG ACCGGCCCGA GGATGCGCCC
CGTCCCGAAC CAAAGATCAC TCAGATGGCG CGGATCGATC CGCGCAGATG CGTCGGTTGC
GCCGCATGCA TCCATGCATG TCCTCAGCAC GCGCTCGAAG TCGATTGGAA AACGGATCTG
CCCAGGTTCA TGGAGAGGAT GGTGGAATAC ACCGCCGGGG CCCTCAAGGG AAAGGAGAAA
CATTCCCTGT TCATCAATTT TCTCACCCAG ATTTCACCGG CCTGCGACTG CCATTCCTAT
GCCGATGCCC CCATCGTGGC GGACATCGGA ATCCTGGCTT CCCGCGATCC GGTGGCCATC
GACCAGGCGT CCATGGACCT CGTGAATGCG CAGCCGCCCC TGGATTCCTC GTGCATCGCG
GGCAACCCGT TCGCCCGCGA AGACAAGGTG AGGGCCGTGT ATCCCCATAT CGACTGGCAA
CATCAACTGG ATTATGCCGA ATCGGTGGGC CTGGGCGGCA GAGCTTATGA CCTGGTAAAA
GCTTGA
 
Protein sequence
MASRVYYTDL RAGNDQSLLD KIRNLAESAG IQKVVRKRGL TAVKIHFGER GNTAFIRPLL 
VRPVIDSIVR AGGKPFLTDA NTLYVGTRGN AVDHLTTAVL NGFAYAVVGA PLIVADGIDG
KDDVTVPLNF KHCKEAFVGT AIARADSIIS LAHFKLHEAT GFGGAIKNVG MGSASRRGKM
AQHSEVSPQL ILKNCIGCGV CRDQCAHEAI ELVDRPEDAP RPEPKITQMA RIDPRRCVGC
AACIHACPQH ALEVDWKTDL PRFMERMVEY TAGALKGKEK HSLFINFLTQ ISPACDCHSY
ADAPIVADIG ILASRDPVAI DQASMDLVNA QPPLDSSCIA GNPFAREDKV RAVYPHIDWQ
HQLDYAESVG LGGRAYDLVK A