| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0862 |
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| Symbol | |
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| ID | 4460724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1066391 |
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| End bp | 1067518 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639701625 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_844994 |
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| Protein GI | 116748307 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA GGGGGTTGCT CCTGTTGGCC CTGACGTTGT CGCTTCTTCC GGGAACCGGC
AGCCTTGCGC TTGCCTCCGA CACCATAAAG ATCGGGCTCT ATCTGCCCAT GACCGGTGGC
GTCGCGGCCT ACGGCGAGAT GGAGTGGGCG GGAATTCAGA TTGCCCGGGA CATGGAGCCT
CAGGTTCTCG GAAAGAAGAT CGACCTCGTT CTGCTCGACA CCAAAAGCGA CAAGATCGAG
GCGACGAACG CGATGACCCT GTTAGTGGAA AAAGAAAAAG TCGCGGGAAT CATCGGCGAA
GCCATCAGCG GCAACACCAT GGCCGGTAAC CGGATCTCCG AGGCGGCGGG AATTCCGTCG
GTCAGCCCGA GCGCTACGAG CGTCCTGGTC AATCAGGGCA AGAAGTTCGC TTTTCGCGCC
TGCTTCATCG ATCCCCTCCA AGGGGAGGTC GCCGCGCGAT TCGCCGTCAA CAACCTCAAG
GCCAAAAGCG CCGCCGTTAT CATTGACAAC GCCCAGGACT ACTGCGTCGG TCTCGCGAAG
TTCTTCGAAA CGGAATTCGT CAAGCTCGGC GGCAAGGTGC TTTCAAAGAC CTACATCCAG
ACCGGAGACC AGGATTTCTC CGCCCAGCTT TCATCGGTCC AGGCCGTGAA GCCCGACATC
ATCTACGCCC CCAACTACTA CACGGAAGAC GCCCTGTTGG CCAAGCAGGC CCGTGACCTC
GGGATCGTCT GTCCCATTCT GACCGGAGAC GGGGCCCAGG CGGACACGCT CATCCAGGTG
GGCGGCAAGG CCGTGGAGGA CATGTATTTC ACCGCACATT TTCACAAGGA CGCCGCCACC
ACGGACCGGG CCGCGGAATT CATGAAACGA TACAAGGAGA AACACAACAA GGAAGCCGAT
GCCTTTCAAG CGCTCGGGGC GGACGCCTAC TTTCTGCTCG TGGACGCCGT CAGGCGCGCC
GGGAGCACGG ATGGCGCCAG GGTCCGCGAT GCCCTTGCGT CTACAAAGGA CTTCAAGGGA
GTCTCCGGGA CGATCACCAT GGGAGAGGAA GGCAATCCCA TCAAGAGTAT GGTCATCCTC
AAGGTGGCAA ATGGAAAGTT CGTCTACGTG ACGACCATCA ATCCTTAG
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| Protein sequence | MKKRGLLLLA LTLSLLPGTG SLALASDTIK IGLYLPMTGG VAAYGEMEWA GIQIARDMEP
QVLGKKIDLV LLDTKSDKIE ATNAMTLLVE KEKVAGIIGE AISGNTMAGN RISEAAGIPS
VSPSATSVLV NQGKKFAFRA CFIDPLQGEV AARFAVNNLK AKSAAVIIDN AQDYCVGLAK
FFETEFVKLG GKVLSKTYIQ TGDQDFSAQL SSVQAVKPDI IYAPNYYTED ALLAKQARDL
GIVCPILTGD GAQADTLIQV GGKAVEDMYF TAHFHKDAAT TDRAAEFMKR YKEKHNKEAD
AFQALGADAY FLLVDAVRRA GSTDGARVRD ALASTKDFKG VSGTITMGEE GNPIKSMVIL
KVANGKFVYV TTINP
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