Gene Sfum_0856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0856 
Symbol 
ID4460718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1060879 
End bp1061580 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content61% 
IMG OID639701619 
ProductABC transporter related 
Protein accessionYP_844988 
Protein GI116748301 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAGA TAATGGATCT TCACGTCTTC TACGGCGGCA TCCACGCGCT CAAGGGAATA 
CGGCTTGCCG TCGGCGAAGG CCGTATCGTC ACGCTCATAG GCTCTAACGG CGCAGGCAAG
AGCACGACCT TGCGCAGCAT TGTCGGGCTC GTGAAACCGC AGGCGGGTTC AGTCCGCTTC
CGGGGCGAGG AACTGACCCG GTTGTCCACT CACCAGATCA TCCAACGCGG TATCGGCATC
AGCCCCGAGG GCAGGCACGT CTTTGCGAAT CTGACGGTTT TGGAAAACCT CGAACTCGGC
GCGTATAACC GTACGGCCGC GGAGTTTTCC GGACAATTGG AACGGGTCTA TTCGCTGTTC
CCGCGCCTCA GGGAACGGTG CCGTCAGCTG GCGGGGACCT TGAGCGGCGG GGAACAGCAG
ATGGTGGCGT TCGGTCGAGC GCTGATGGGC CGGCCGAAAC TGGTGCTGCT CGACGAGCCT
TCCCTGGGGC TCGCCCCACT GGTCGTGGAA GAAGTTTTCC AGGCAATCGA GGCGGTGAGA
AAGGACGGGG CCACGGTCCT GCTCGTGGAA CAAAACGCCA TGGCATCGCT GCGGATAGCC
GATTATGCGT ACGTGCTGGA AACGGGCCGA GTGATCCTCG AAGGGGAGGG CAGGGTGCTG
CTCGAGGATG AGAAGGTGAT CAAGGCCTAT CTGGGGGAAT GA
 
Protein sequence
MLEIMDLHVF YGGIHALKGI RLAVGEGRIV TLIGSNGAGK STTLRSIVGL VKPQAGSVRF 
RGEELTRLST HQIIQRGIGI SPEGRHVFAN LTVLENLELG AYNRTAAEFS GQLERVYSLF
PRLRERCRQL AGTLSGGEQQ MVAFGRALMG RPKLVLLDEP SLGLAPLVVE EVFQAIEAVR
KDGATVLLVE QNAMASLRIA DYAYVLETGR VILEGEGRVL LEDEKVIKAY LGE