| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0720 |
|---|
| Symbol | |
|---|
| ID | 4460786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 876473 |
|---|
| End bp | 876922 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639701482 |
|---|
| Product | S-adenosylmethionine decarboxylase related |
|---|
| Protein accession | YP_844853 |
|---|
| Protein GI | 116748166 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1586] S-adenosylmethionine decarboxylase |
|---|
| TIGRFAM ID | [TIGR03330] S-adenosylmethionine decarboxylase proenzyme, Bacillus form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATGG GCAAACCGGA GTTCGGCTTT GGTGTGCACT TGATGGTGGA TGGTTACGGC
TGTGATCCGG TGGGGCTTCA GGATATGAGT CTGATCTACA GTTTCCTGGA CGAATATCCC
GTGCAAATGG ACATGACGAA AATCATGCCG CCGTACGTAT TCCGCTACAA GGGGTCGGTT
CCCGAGGATT GGGGAGTCTC GGGATTCGTC TTGATCGCAG AAAGCCACAT CAGTATTCAT
ACGTTCCCTG AAAAACAGTA CCTCAGCCTC GACATGTTCT CCTGCAAGCC TTTCGACACC
CAGAAGGCGG TGGAAAAGGT GAAGAAATAT TTTAAAATAC AAAAGTTCGA GATGAAGGTG
CTGGACCGGG GGCAGGAATT TCCCAATACG ATCCATGAAT CCGCCCAGGT GGTGCGTATG
GACCGGATGC TGATGCAGCG CTCCAGGTAG
|
|---|
| Protein sequence | MGMGKPEFGF GVHLMVDGYG CDPVGLQDMS LIYSFLDEYP VQMDMTKIMP PYVFRYKGSV
PEDWGVSGFV LIAESHISIH TFPEKQYLSL DMFSCKPFDT QKAVEKVKKY FKIQKFEMKV
LDRGQEFPNT IHESAQVVRM DRMLMQRSR
|
|---|
| |