Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0692 |
Symbol | |
ID | 4460195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 840814 |
End bp | 841587 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639701450 |
Product | Sec-independent protein translocase, TatC subunit |
Protein accession | YP_844826 |
Protein GI | 116748139 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.299574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.13691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACTG ACAAAATGCC CTTCACCCAG CACCTTGAGG AATTGCGCCG AAGACTCGTC ATTTCAGCCA TCGCGGTCGG CCTCGGCTTT ATGATCTGTT ACGCATTCAA GGAAATGCTC TTCGAGGTGC TGATGAAGCC ATGGATCGAG GCCCTGCCCA AGGGACAGGG AGCGAAGCTG ATTTACACGG CGCCTCACGA AGCATTTTTC ACGTACATGA AAGTATCGCT CCTGGGCGGC ACTGCACTGG CGGTGCCGGT GATTCTCTAC CAAGTCTGGC GCTTTGTGGC CCCGGGCCTC TACGAAAACG AAAAGAAATA CCTTCTGCCC ATCGTTTTCG CCTCCTCCGT ATTCTTCCTG GGCGGGGCAA GCTTCGGTTA CTTTTTCGTA TTTCCCGTCG GGTTCCAGTT CTTCACCTCG TTCGCCAGCG ACTTCATCAC TCCCATGATG AGCACCCGGG AGTTCTTTTC CTTTTCCATC CGAATGCTCC TCGCGTTCGG CCTCGTGTTC GAGCTGCCGG TGTTCATGTT CTTTCTCGCC CGGCTGGGGT TGATTTCGTC GGACTACCTC CGCAAGAAAA GAAGGTACGC CATCGTTATT ATCTTCATCA TCGCCGCGGC GGTTACACCC AGCCCGGATG TCTTTTCCCA GTGCCTCATG GCAGGCCCGC TGATCCTTCT CTACGAGGCC AGTGTCTGGA TCGTGTACTG CTTCGGAAAG AAGGAAAAGC GTTCCGCCGG CACGGAGGAG GAAACCGCGG AGTCCACCAC CTAA
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Protein sequence | MTTDKMPFTQ HLEELRRRLV ISAIAVGLGF MICYAFKEML FEVLMKPWIE ALPKGQGAKL IYTAPHEAFF TYMKVSLLGG TALAVPVILY QVWRFVAPGL YENEKKYLLP IVFASSVFFL GGASFGYFFV FPVGFQFFTS FASDFITPMM STREFFSFSI RMLLAFGLVF ELPVFMFFLA RLGLISSDYL RKKRRYAIVI IFIIAAAVTP SPDVFSQCLM AGPLILLYEA SVWIVYCFGK KEKRSAGTEE ETAESTT
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