Gene Sfum_0618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0618 
Symbol 
ID4461680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp745814 
End bp746287 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content56% 
IMG OID639701374 
Productresponse regulator receiver protein 
Protein accessionYP_844752 
Protein GI116748065 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGATGC CCCCCCCCGG ATTCGGATCG CAAGGCGTGC GGCGTCATCG GGACTTTCTT 
GTGAAAGGCA TGCTTATGGA AGGCTTCAGA GTACTGGTTG TCGATGATGA GACCGATTTC
CTGGAAACCA TCGTGAAACG CTTGAGAAAG CGCAAAGTGG ACGCCGTCGG CCTGACCAGC
GGCGTGGAAG CGTTGAAATA TCTCGAAACG GAGCATTTCG ACGTGGTGAT CCTGGACGTC
AGAATGCCCG GACTGGACGG CATAGAAACC CTTAAGGAGA TGAAGAAAAA GAGACCCCTC
ATGGAGGTCA TCATGCTCAC GGGGCACGCT TCCGTCGAGT CGGGCATGCA GGGAATGCAG
TTGGGTGCGT TCGACTACGT CATCAAGCCC GCGGATTTCG ATGAACTGAT GGAGAAGATC
CGGCAGGCGC GCGAGAGAAA ATCGATCCAC GAGGAAAAGC TCCGGCGGGG CTAG
 
Protein sequence
MKMPPPGFGS QGVRRHRDFL VKGMLMEGFR VLVVDDETDF LETIVKRLRK RKVDAVGLTS 
GVEALKYLET EHFDVVILDV RMPGLDGIET LKEMKKKRPL MEVIMLTGHA SVESGMQGMQ
LGAFDYVIKP ADFDELMEKI RQARERKSIH EEKLRRG