Gene Sfum_0541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0541 
Symbol 
ID4460579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp660589 
End bp661164 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content59% 
IMG OID639701297 
Producthypothetical protein 
Protein accessionYP_844675 
Protein GI116747988 
COG category[S] Function unknown 
COG ID[COG3034] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.428069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.577988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCGG CTCATGCGGA GGGAACATGG GACGGGGACT CTTCCGTCAT TGAACGCGCC 
GGCCACGAGA AGGCCGCGCT CCGTGTCGAT TACCTCACAC CCGCCTCAGC GATCAAGAGT
CCCGAAATTT TCGTCTACAA GGAAAAACGG AGGCTGTACG TCATCCAATC CAATGTGCTC
GTTCGTGATT ACCCGATCGG CCTGGGGCCG CATCCGAGCG GGGACAAGGA TCGTGATGGC
GATGGAAGGA CTCCCGAAGG AGATTTCTTC ATTATCGTCA AGGGTTCTTC CGAGCGGTTG
AAAAAATCGC TTGCCATCAG CTATCCGGGC CGTGGGCATG CCGAGAAGGC GTATTTCTCC
GGTGTGATCA CCCCGTTGGA ATTCCGTGAC ATTCTTCGCG CCGCGGACAA CAGGTCCGCC
CCTCCCTCGG GCACGGTGCT CGGCGGGAAG ATTTTTATCC ACGCCGGGGG AGCCCACAAA
GACTGGACCG ACGGCAGCAT CGCCCTCTAC GACAGCGACA TGGAGGAGCT CTTTACGGTC
GCTTCGGTGG GCACGCCGGT TTCCATCCGT CCTTAA
 
Protein sequence
MESAHAEGTW DGDSSVIERA GHEKAALRVD YLTPASAIKS PEIFVYKEKR RLYVIQSNVL 
VRDYPIGLGP HPSGDKDRDG DGRTPEGDFF IIVKGSSERL KKSLAISYPG RGHAEKAYFS
GVITPLEFRD ILRAADNRSA PPSGTVLGGK IFIHAGGAHK DWTDGSIALY DSDMEELFTV
ASVGTPVSIR P