| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0489 |
|---|
| Symbol | |
|---|
| ID | 4461496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 587952 |
|---|
| End bp | 588851 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639701245 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_844624 |
|---|
| Protein GI | 116747937 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.111687 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGAC TGGGGGTCGA CCTGGGGGGG ACGAAAATCG AGATCATCGC CCTGGACGAC
GGCGGCAATG AGCTCGCGCG ATTCCGCGAA GCCACTCCGC GGGGCGATTA TCGGTCCACC
CTCGAGGCCG TGGCCCGGTT GGTTTCGAAA GTCGAGGCCG AGCTCGGGGG GGAACGGGGA
AGCGTCGGGA TCGGCACTCC CGGGGCCGTT TCCAGGGCCA CCGGCCTGCT CAGGAATTCC
AATTCCGTGT GTCTCAACGG AAAACCCATT GCGCGGGACC TGGAAGCCGT GCTCGGTCGC
CCCGTTCGCA TCGCTAATGA CGCCAACTGC TTTGCTCTTT CGGAATATCG GGATGGAGCG
GCCCGCGGAG CGCGGGTGGT CTTCGGAGCG ATCGTCGGCA CGGGCACGGG CGCGGGGATC
GTGGTTGGAG GCGAGGTGCT GGAAGGCGTG AACGCCATCG CCGGAGAATG GGGTCACAAT
CCGCTTCCCT GGCCGAAGGA CGACGAACGG CCGGGGCCGC GCTGCTACTG CGGTCGCTAC
GGGTGCATCG AGACGTTCCT TTCCGGCCCG GGCATGGCGG CCCTGCATGC ACTGTCCACG
GGGGACCGGC TCCCGCCGGA GGAAATCGTC GCCCGGGCGG ACGAGGGCGA TCCCTCGTGC
GAGCACACCC TGCTGCGGTA CGAAGACCGC ATGGCCCGTT CGCTGGCGCA TGTCATCAAC
ATCCTCGACC CCGACGTCAT CGTTTTGGGC GGGGGCATGT CCAACATCCG GCGCCTGTAC
CGCAACGTCC CACGGCTGTG GGGCGCCTAT GTCTTTTCCG ACCGGGTGGA CACGCGCCTG
GTGCCTCCGC GGTTCGGCGA CTCCAGCGGA GTGCGCGGCG CCGCCTGGCT CTGGGGGTGA
|
|---|
| Protein sequence | MLRLGVDLGG TKIEIIALDD GGNELARFRE ATPRGDYRST LEAVARLVSK VEAELGGERG
SVGIGTPGAV SRATGLLRNS NSVCLNGKPI ARDLEAVLGR PVRIANDANC FALSEYRDGA
ARGARVVFGA IVGTGTGAGI VVGGEVLEGV NAIAGEWGHN PLPWPKDDER PGPRCYCGRY
GCIETFLSGP GMAALHALST GDRLPPEEIV ARADEGDPSC EHTLLRYEDR MARSLAHVIN
ILDPDVIVLG GGMSNIRRLY RNVPRLWGAY VFSDRVDTRL VPPRFGDSSG VRGAAWLWG
|
|---|
| |