Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0461 |
Symbol | |
ID | 4460270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 555407 |
End bp | 557392 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639701217 |
Product | hypothetical protein |
Protein accession | YP_844596 |
Protein GI | 116747909 |
COG category | [C] Energy production and conversion [I] Lipid transport and metabolism |
COG ID | [COG0511] Biotin carboxyl carrier protein [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00676863 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0747191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAACA AACATCTGCA CGGCACGTCA TTGATCGCGA AGCTGCAGGA CGATCCAAAA GTGAAAGTGG ACAACCCGAT CAAAATCGGA GACCTTACTT TCCGTGACGG ACATCAATCG CTCTTCGCCA CCCGCGGAAG AACGGAAGAC CTTTTGCCGA TCGCCGAGGA AATGAACAAA ATCGGATACT GGTCGATGGA AGTCTGGGGC GGAGCGACTT TCGATACGAT GCACCGTTTT CTCAATGAAG ACCCCTGGGA AAGACCGCGC CAGTTGAAGA AGTATCTCAA GGACACCCCC ATGATGATGC TGCTTCGCGG TCAGAATCTG GTCGGATACC GCAACTACGC CGACGACATG GCCGAAGCCT TCGTCGACCG CGCCTGCATC AACGGCATCG ACATTTTCCG CACTTTCGAC GCGGTCAACG ACTTCCGGAA TTTTGAAACC GTTATCAAGC CCATCAAGAA ACACAAGAAG CACTTCCAGG GGACCATTTG CTACTCCCTG ACCGAACCCC GCATGGGCGG CCCGGTGTAC AACCTGGACT ATTACGTCAA GAAAGCCAAG CAGTTGGAAA ACATGGGCGC GGATACCGTC TGTATCAAGG ACATGGCCGG TTTGATCGCC CCTTACGACG CCTACTACCT GGTCAAGGCC TTGAAAGAAA ACGTCAAGGT CCCCATTCAT CTCCACAGCC ATTTCACCTC CGGCATGGCC GACCTGGCGC TGCTCAAGGC GATCGAAGCC GGTGTCGATA TCGTCGATAC CTGTCTTGCT CCGTGGGCGT ATCGCAGCTC CCATCCGGCC ATCGAGCCCC TGGTCATGAC CCTCAGGCAC ACCAGCAGGG ACACGGGTTT CGACCTCCAT CAGCTTGCAA AGTGCAGTAC GCACTTCGAG AAGGTGTCCC CGAAGTACCG CCATCTTCTC GATGACCGTA TGGCCACGAT CGACATCGGC GTTCTGCTGC ATCAGACGCC GGGCGGCATG CTGTCCAACC TGATCAATCA GCTGCGCGAC ATGGGCGCCT CCGACAAGCT GGACGCCGTG TTCAAGGCAC TGCCGCAGGT CCGCAAGGAA ATGGGCCAGG TTCCCCTGGT GACCCCGACC AGCCAGATCG TCGGCATCCA GGCCGTGAAC AACGTTCTTT TCGACACCCC GCAAGAGCGT TACAAGATGA TCTCCGCGCA GAGCAAGGAC CTGTTCTACG GTCTGTACGG CGAAACCCCG GTTCCCGTGG ATCCGGAAAT CCAGAAGAAG GCGCTCAAAG GCTATCCTCG CGGTGAAACC CCGACGACCG CCCGCCCCGC CGACGTGCTG GAACCGGAAA TGGAAAAGAA CTGGAAGGAT ATGGAAGGTC TTGCCAAGGA CATCGACGAC GTTCTGATCT ACGGCATGTA CCCCATGACC GGCAAGCGCT TCCTCAACTG GAAGTACGGC AAGGAGCCGG TGCCCAAGGA AGTCATGCCC AAGACCCTCG AGGATTGCGC AAAAGAGGCG GATCTGGTCA AGAAAGCCAA GGCCGGCCTC CTCGTCGAGA AGCCGACCAA GGTCGCTCCC GAAAAGGGAC CCGGTCTGCG CACCTTCAGC GTGTTTGTGG ATGAGGAGTT CTTCGAGGTC GGCGTCGAGC AGATCGGCGG CGCTCCCGCC ATCACTTCCA TCACCCCCAT GGTTGCTCCT GTAGCGGCTC CCGCCGCAGC CCCCGCCGCA GCCCCCAAGC CTGCGGCAGC ACCCGCTGCA GCTCCCAAGC CCGCGGCCGC TCCGGTCGAG GGTGGGACCA AGCTGGAAGC TCCCATGCCG GGCATGGTCA TTCGCTACGA AGTGAAGGAA GGCGATTCGG TCAAAGAGGG CGACGTCGTG ATGATCCTCG AGGCCATGAA GATGGAAAAC TCCATCACGG CCCCCGCTGC CGGCGTCATC AAGCAGATTT GCTGCAAGGA CGGCCAGAGC GTGCAGAAGG GTGACGTGCT GGCGGTCATC GGCTAG
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Protein sequence | MENKHLHGTS LIAKLQDDPK VKVDNPIKIG DLTFRDGHQS LFATRGRTED LLPIAEEMNK IGYWSMEVWG GATFDTMHRF LNEDPWERPR QLKKYLKDTP MMMLLRGQNL VGYRNYADDM AEAFVDRACI NGIDIFRTFD AVNDFRNFET VIKPIKKHKK HFQGTICYSL TEPRMGGPVY NLDYYVKKAK QLENMGADTV CIKDMAGLIA PYDAYYLVKA LKENVKVPIH LHSHFTSGMA DLALLKAIEA GVDIVDTCLA PWAYRSSHPA IEPLVMTLRH TSRDTGFDLH QLAKCSTHFE KVSPKYRHLL DDRMATIDIG VLLHQTPGGM LSNLINQLRD MGASDKLDAV FKALPQVRKE MGQVPLVTPT SQIVGIQAVN NVLFDTPQER YKMISAQSKD LFYGLYGETP VPVDPEIQKK ALKGYPRGET PTTARPADVL EPEMEKNWKD MEGLAKDIDD VLIYGMYPMT GKRFLNWKYG KEPVPKEVMP KTLEDCAKEA DLVKKAKAGL LVEKPTKVAP EKGPGLRTFS VFVDEEFFEV GVEQIGGAPA ITSITPMVAP VAAPAAAPAA APKPAAAPAA APKPAAAPVE GGTKLEAPMP GMVIRYEVKE GDSVKEGDVV MILEAMKMEN SITAPAAGVI KQICCKDGQS VQKGDVLAVI G
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