| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0449 |
|---|
| Symbol | |
|---|
| ID | 4461035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 540969 |
|---|
| End bp | 541946 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639701205 |
|---|
| Product | transketolase domain-containing protein |
|---|
| Protein accession | YP_844584 |
|---|
| Protein GI | 116747897 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.94075 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.765018 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAAC TGACCATGGG ACAGGCGGTG AACCAGGCGC TCAGAGAGGA AATGCTTCGC
GACCCGAATG TTTTTATCGC GGGCGAGGGC GTCGGGGTGA GCATTCACGC CGCTCCGGTC
CTTCCCACCT TCGGACTGCT GGAGGAATTC GGCCCGGATC GGGTGAAGGA TACGCCGGTT
TCGGAGGCGG CCATCGCCGG ACTGGCGGTC GGCGCCTCCG TGATGGGATT GAGGCCGGTG
GTGGAAATCA TGTTCAATCC TTTCGTGACC CTCGCTTCGG ACATGATCGT CAATCATGCC
GCAAAGCTCC GGTACCTGTC GGGCGGGAAG AGCACTTTCC CCATGGTGGT GAGGATAAAG
AGCGGGGCCG GGTTCAAGGC GGGATGCCAA CATTCTCATA ACCTGGAAGC CTGGCTCGCG
CACTGTCCGG GAATCAGGGT GGTGATGCCT TCAACCCCGG CGGATGCCAA GGGCCTGCTC
AAGTCCGCCA TACGGGACGA CAATCCCGTG GTGTTCATCG AAGACATGTT GCTCTATTTC
GTGCCCGGAC CGGTGCCCGA AGAGGAATAC CTGGTTCCCA TAGGGAAGGC GGACGTCAAA
CGGCAGGGTT CCGACGTCAC CATCGTGACC TGGTCCAAGA TGCTGGGAGC GGCCATGAAG
GGCGCCGCGC TGCTGGAACA AAAGGGTGTA TCCGCCGAGG TGATCGATCT GCGCACCCTC
GCGCCGCTCG ATAAGGATGC GATTCTCGAT TCCGTGAGAA AGACCGGCCG GCTGGTGGTG
CTCCACGAGG CCACGCGAAC GGGCGGGTTT GCCGGAGAAA TCTGCGCCCT GGTTGCCGAA
GAAGCGCTGG GCAGTCTCAA AGCGCCTTTC CGACGGGTGA CCGGCCCGGA CATCCCCGTG
CCTTTCAGCC CGCCGCTCGA AGCGTTCTAC ATCCCCGACG AGCACGACCT GGTAAAGGCG
GTGGAAAGCA TCGTCTGA
|
|---|
| Protein sequence | MQQLTMGQAV NQALREEMLR DPNVFIAGEG VGVSIHAAPV LPTFGLLEEF GPDRVKDTPV
SEAAIAGLAV GASVMGLRPV VEIMFNPFVT LASDMIVNHA AKLRYLSGGK STFPMVVRIK
SGAGFKAGCQ HSHNLEAWLA HCPGIRVVMP STPADAKGLL KSAIRDDNPV VFIEDMLLYF
VPGPVPEEEY LVPIGKADVK RQGSDVTIVT WSKMLGAAMK GAALLEQKGV SAEVIDLRTL
APLDKDAILD SVRKTGRLVV LHEATRTGGF AGEICALVAE EALGSLKAPF RRVTGPDIPV
PFSPPLEAFY IPDEHDLVKA VESIV
|
|---|
| |