Gene Sfum_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0393 
Symbol 
ID4461416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp473731 
End bp475044 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content63% 
IMG OID639701148 
Producthypothetical protein 
Protein accessionYP_844528 
Protein GI116747841 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.544976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATCGA TGAAACACCT GGCGTTGCTC CTCAGGGAAG TCGAAGATCA ACTGGTGGTG 
TGCATGCGAT GCGGTATGTG CCAGTCGGTG TGCCCCCTGT TTGCCGAAAC GGGCAGGGAA
TCGGACGTCG CGCGCGGAAA ACTGGCACTC CTGGACGGAC TGATGCAGGA GATGTTCAAG
GATCCGGCGG GGGTGAGCGA TCGATTGAAC CGCTGCCTGC TGTGCGGTTC GTGCGCCGCC
AATTGTCCGA GCGGGGTCAG GGTGCTCGAC ATCTTTATCA AGGCGCGGGC CATTCTCGGC
GGGTACATGG GGCTCTCGCC CCTGAAAAAA CTCTTATTCC GGCAGATGCT GGCGCGCCCC
GCCTTGTTTG ACCGTATCGT GGAGATGGGG TCCAGGTTCC AGTCCCTGTT CATCCGATCG
GTGGACGACC TGCTCGGGAC GTCGTGCGCG CGCTTCCAGT CGCCGCTGGG AGAGCGGCAT
TTCAAGGCGC TCGCCGCGGT GCCGCTGCAT GTGCGCACAC CGGCGCTGAA CGCGCCCGCG
GGCGGGTCGG GCATCAAGGT CGGGGTGTTC GTGGGCTGCC TGGTGGACAA GGTGTTTCCC
GAAGTGGGCG AAGCCGTTCT GAAGGTATTG AGACATCACG AAGTGGGTGT GTTCATGCCC
GATGGACAGG CCTGCTGCGG GATTCCCGCC CTGTCGTCCG GGGATCTCGA AAGCTATCGC
GCCCTGGTGC GGCACAACCT GTCCAGATTC GCACCGGGAG AGTTCGATCA CCTGATCACG
CCGTGTGCCA CGTGTACCTC AACGATCCGG AAAATCTGGC CTCTGATGGC CGGCGATTTG
AGCGCGGAGG AACGGGAACG GGTTCGGTTG CTGTCGGAAA AGACGCTGGA CGTGTCCCAA
TTCCTGGTCG ATGTGCTCCA TGCAGCCTTG GCCGAGGGGG CGGAGGAAAC CGGGGAGCGG
CGCCTGATCA CCTACCACGA CCCGTGTCAT CTCAGGAAAT CCCTGGGGGT GTACGCTCAA
CCCCGGTCCC TGATCCGGGC CAATCCGCGC TATGCATTCA GGGAAATGGC CGAACCGGAC
CGCTGCTGCG GCTGCGGGGG CAGTTTCAAC CTGCAGCACT ACGAGCTCTC CGCCGCCATC
GGCAGGCGCA AGCGGGACAA CATTGCGGCT TCCGGCTGTT CCGAGGTGGC CACGGGATGC
CCCGCGTGCA TGCTCCAGCT CTCGGACATG CTGTCCCGGG CCGGTGACCG GGTTCGGGTC
CGGCACGTTG TGGAGGTCTA TGCCGAAGCC CTGGATGACA ACCGACAATC CTGA
 
Protein sequence
MRSMKHLALL LREVEDQLVV CMRCGMCQSV CPLFAETGRE SDVARGKLAL LDGLMQEMFK 
DPAGVSDRLN RCLLCGSCAA NCPSGVRVLD IFIKARAILG GYMGLSPLKK LLFRQMLARP
ALFDRIVEMG SRFQSLFIRS VDDLLGTSCA RFQSPLGERH FKALAAVPLH VRTPALNAPA
GGSGIKVGVF VGCLVDKVFP EVGEAVLKVL RHHEVGVFMP DGQACCGIPA LSSGDLESYR
ALVRHNLSRF APGEFDHLIT PCATCTSTIR KIWPLMAGDL SAEERERVRL LSEKTLDVSQ
FLVDVLHAAL AEGAEETGER RLITYHDPCH LRKSLGVYAQ PRSLIRANPR YAFREMAEPD
RCCGCGGSFN LQHYELSAAI GRRKRDNIAA SGCSEVATGC PACMLQLSDM LSRAGDRVRV
RHVVEVYAEA LDDNRQS