Gene Sfum_0386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0386 
Symbol 
ID4461619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp462836 
End bp463363 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content67% 
IMG OID639701141 
Productindolepyruvate oxidoreductase subunit beta 
Protein accessionYP_844521 
Protein GI116747834 
COG category[C] Energy production and conversion 
COG ID[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAGA TTATCGTGAG CGGCATCGGA GGCCAGGGGG TGTTGTTCGT GACGAAACTC 
CTCGCGCAAA CCGCGGTGGA CACCGGCCGG TCGGTATTGC TTTCGGAGAC TCACGGGATG
GCCCAGCGAG GAGGCAACGT CATCAGCCAC CTGAAAGTTG CGCCGCGCGA GCAGTCCGGC
ACTTCCCCGG TCAGTCCCCT GGTGCGTCCC GGGCACGCGG ACGTGCTCCT GGCGTTGCAC
CCGGACGCCC TCGCCGCCCA TGGCTTCTTT CTCAGACCCG GCGGCCGGGC GTTTTGCAAC
GCGTCGGGCA CTACGGCGGA AGGATCGCTC GATGCCTCGG CCATTGCCGG GTCGCTCGGT
TCGGCCGTAT CGGCCAACCT GGTGTTGCTC GGGTTTGCCG CCGCTTCCGG CGCGCTTTTC
TGCGACCCGG CACAGCTCGA AACAACCCTC GCGCGCATCG GGGGCAAACG TACCGAATCG
TCCCTGGCGG CATTTCGGGC CGGCCTGAAG GCCGCTTCGG CGCCCTGA
 
Protein sequence
MQQIIVSGIG GQGVLFVTKL LAQTAVDTGR SVLLSETHGM AQRGGNVISH LKVAPREQSG 
TSPVSPLVRP GHADVLLALH PDALAAHGFF LRPGGRAFCN ASGTTAEGSL DASAIAGSLG
SAVSANLVLL GFAAASGALF CDPAQLETTL ARIGGKRTES SLAAFRAGLK AASAP