Gene Sfum_0374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0374 
Symbol 
ID4461607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp447307 
End bp448056 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content61% 
IMG OID639701129 
Productglycosyl transferase family protein 
Protein accessionYP_844509 
Protein GI116747822 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.961708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGG GCATATCCGC GGTCGTCATC ACCTGGAACG AAGCCTCGAA CATCAGGGAC 
TGCCTTGCAA GCGTGCGGTG GGCCGCCGAG ATGATCGTGC TCGACCGGTT CAGCACGGAC
GACACGGCCG CCATCGCCCG GGAGTGCGGG GCACGGGTTT ACCAGGAGGA ATGGAAGGGG
TTCGCGCGCC AGAAAAACAG CGCCGTCGAA AAGGCCGTCA GCCCGTGGAT CCTGAGCCTG
GACGCCGATG AACGGGTCTC CCCGCTCCTG GCCGAGGAAA TCCAGGCCGT GGTCGGGCGG
CCCTACGCCC TCGACGGCTA CCACATTCCG AGAAAGAACT TCTTCGACGG CCGATGGATT
CGGCACGGCG GCTGGCACCC GGATTACGTG TTGAGATTGT TTCGGAAAGG CAGCGGCCGT
TTCCAGGATC GCAGGGTGCA CGAACGTTTG GTGCTCGAGG GAAAGTCGGG CTACCTGCGC
AGCCCCATCG AACATTACAC CTATCGTTCG GTGTCGGACT ACCTGGCCCG CATGGACCGC
TACAGCCTGC TGGCGGCACA GGAGACCGAG TCCGACGGGA AAGCCGCGTG GAGCTCTCTG
TGCCTGAGAC CGGCCTTCAC CTTTTTCAAG ATGTACCTCC TCCGGGGAGG CTTTCTCGAC
GGCAAGGCGG GGTTTTTTCT TGCGGTTTCC TATGCCTACT ATACGTTTCT GAAGTATTAC
CGCGCCTCCA TTGGAGACGC TTCGGAATAG
 
Protein sequence
MKPGISAVVI TWNEASNIRD CLASVRWAAE MIVLDRFSTD DTAAIARECG ARVYQEEWKG 
FARQKNSAVE KAVSPWILSL DADERVSPLL AEEIQAVVGR PYALDGYHIP RKNFFDGRWI
RHGGWHPDYV LRLFRKGSGR FQDRRVHERL VLEGKSGYLR SPIEHYTYRS VSDYLARMDR
YSLLAAQETE SDGKAAWSSL CLRPAFTFFK MYLLRGGFLD GKAGFFLAVS YAYYTFLKYY
RASIGDASE