| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0296 |
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| Symbol | |
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| ID | 4460898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 356499 |
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| End bp | 358205 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639701051 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_844432 |
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| Protein GI | 116747745 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.414678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.470316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGTCCG CCGATCCGTT TTTCAACAAC TTTCGAACTC ACTCGAAGGA GGAAACACAG
ATGGCCGGAT TGACAGGCGG CAAGCTGGTT GCAAAAACCC TCGCCACAGA GGGGGTTCAA
GCCATTTTCA CGCTCTGCGG CGCTCACGTC ATGGACATTT ACAGCGGGTG CCTGGACGAG
GGAATCCGCA TCATCGACGT GCGGCACGAG CAGACGGCGG CCCATGCGGC GGATGCATGG
ACCAGGCTCA CCGGCGTCCC GGGGGTCGCC GTGGTCACGG CCGGACCCGG GGTGACCGAT
GCGGTCACCG GGGTGGCCAA CGCGTACAGA GCCCAAGTGC CGATGCTTCT CATCGGCGGT
CAGGCTCCGA TCCGGAACCT GCTCAAGGGC GGACTGCAGG AAATGAATTC CGTGGACATG
ATGCGCCCCA TCACCAAGTT CTCGGGCACG GTCTTCGATA CCGTGCGCAT CCCGGAGATG
ATCGGGCTCG CGCTCCGGGA AGCCTGCAAC GGGCGTCCGG GTCCGTCTTT TCTCGAAATT
CCCCAGGACG TGCTGGATCG GGAAGTGGAA GAAAACGAGG TCCGCGTCCC CGTTCAGTCC
CGCTCCCAAT GCCGCCTGAC GGGTGACAGG AAACTCATGG CCCGGGCCGC CGGACTGCTC
GCCAAAGCGC AGCGCCCCGC GCTGATCGCC GGGACGCAGG TCTGGAGCTG CCGTGCGGTG
GAACAGCTGC GTTTGTTTGT GGAACGGGCC GGGATTCCCA CCTACCTCAA CGGCGCGGCG
CGAGGTTGCC TGCCGGTCGA TTCGCCGCAC GCGTTCAATC GGACCCGAAA GTTCGCGCTT
TCCAAGGCCG ACGTCGTGCT GGTCATCGGC ACTCCGTTCG ACTTCAGGCT TGGATACGGC
AGCCGAATTG CAGAGGGGGC GAAGATCATC CAGGTCGACC TCGACTACGC GGAGCTGTGT
CATAACCGTG ACGTGGAAGT GGCCATACAG GCGGACGCGG GTGCTTTCCT GGAAGAGCTC
GAGGGCGCCG TGTCACCTGC CGGAGGAACC CGCAAGTGGC TCGACGAGCT GCGTACCATG
GAAACCGAGC TTCTGGAGAG GGAAAGTCGT TTTCTGAGCT CGGATGCCGT GCCGATTCAC
CCGCTCAGGC TCGCGCGCGA GATCGATGCT TTCCTCCGGG ACGACAGCAT CCTCATCGCC
GACGGCGGCG ACACCGTCAC GATGTCGGCG AGCGTGATAC GGCCACGAGG GCCCGGCCAG
TGGCTCGACC CCGGTCCGCT CGGCACGCTG GGAGTGGGAA CGCCGTTCGC CATCGCCGCC
AAGGCGGCCA TGCCGGCCAG GGACGTCGTG GTGCTTTTCG GTGACGGAGC CTTCGGGTTG
ACCGGGTTCG ATTACGATAC GCTCATTCGG TTCAACCTGC CCATGGTCGG AATTGTGGCC
AACAACGGGG CGTGGAATCA GGTGCGCTAC GTGCAGTTGT TGAAATACGG ACCCCAAAAG
GGGAATACGG CCAATCTGCT CCATTCTCTG CGCTACGACC GGATTATCGA GGCCATGGGC
GGACACGGCG AGCACGTCAC CGAACCGGGC GAAATACGGG CCGCCCTCGA CCGCGCCCGA
AATTCCGGCA AGCCGGCATG CGTCAACGTT CTCGTGGACC GCGAGACGTT CAGCTCCAGC
ACCCGCGATT TGACCATTTA CAAGTGA
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| Protein sequence | MGSADPFFNN FRTHSKEETQ MAGLTGGKLV AKTLATEGVQ AIFTLCGAHV MDIYSGCLDE
GIRIIDVRHE QTAAHAADAW TRLTGVPGVA VVTAGPGVTD AVTGVANAYR AQVPMLLIGG
QAPIRNLLKG GLQEMNSVDM MRPITKFSGT VFDTVRIPEM IGLALREACN GRPGPSFLEI
PQDVLDREVE ENEVRVPVQS RSQCRLTGDR KLMARAAGLL AKAQRPALIA GTQVWSCRAV
EQLRLFVERA GIPTYLNGAA RGCLPVDSPH AFNRTRKFAL SKADVVLVIG TPFDFRLGYG
SRIAEGAKII QVDLDYAELC HNRDVEVAIQ ADAGAFLEEL EGAVSPAGGT RKWLDELRTM
ETELLERESR FLSSDAVPIH PLRLAREIDA FLRDDSILIA DGGDTVTMSA SVIRPRGPGQ
WLDPGPLGTL GVGTPFAIAA KAAMPARDVV VLFGDGAFGL TGFDYDTLIR FNLPMVGIVA
NNGAWNQVRY VQLLKYGPQK GNTANLLHSL RYDRIIEAMG GHGEHVTEPG EIRAALDRAR
NSGKPACVNV LVDRETFSSS TRDLTIYK
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