| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0231 |
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| Symbol | |
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| ID | 4461307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 271546 |
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| End bp | 274056 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639700986 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_844367 |
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| Protein GI | 116747680 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0172365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.333041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCAT GGGCCTTCCG GTTCATGCCG GTTTTGACGA AGCGGAGCTT CACCGATAAG
GTTCAGACGT CCGTTGCCCT TTTCCGGACA ATGAAAAACG ACACGCCCGG CGGTCCGCAA
TGGATTGCCC CCTCCCTGGA AGGAAACGCC GTGAAGGTTT CGATGGAATC GCCGGAAGAC
GCAATGAGTG AATGCAGCAG CCTTCGGGAA CGGGTGAGGG AACTGGAGTC CGCGGAAAAT
CCATTCCGGA CGGCACTGGA AGATCACGAT GAGCTGATTG TTCGTTTCCG GCCCGATTTC
ACGCTCGTGT ATGCAAACCA GGCCTATTGC CGACATCTTG CCGATACCGA AGCGCCGTGC
GTGGGAGGGA ATTTCCTGGA CTGCGTCAAT CCGGCCGACC ACGATCGGGT CAGGGAGGAA
ATCGGTTCGC TGGTCCCGGA TGGTCCCGTC AAGACCGTCG AACACGGAGT GCTCCTCGGA
GGCAGAGAGG TTCGTTTATC CCGATGGGTC TATCGCGCCA TGATCGGTGA ACGGACCGAC
GTGATCGAAT ACCTCGGCAT GAGTTGTGTC CAGGGAGAAC GGATAGCCCA CCCCGGGCCA
TGGAACGAAT ACCGCTTTCT TGCGGAGAAG ACCGGCAACG CGGCGTATCG GCTCAGATGC
GATTCCCGGA CCTACGATCA CCTCGGTCCC GCCATTACGA GGCTTACCGG GTACCCGTTG
GACGAGTTCG ACGTATCGAA GTTTTCCGAG CTGATCGAGA AGATTGAAAT TCCGGGGGAA
GAGGACGTCA CGCCGGATAC CCTGATCGGG TTTCGGAAGG AAGGAAGAAC GGGAGAATAC
AGGGCCGATT ACCTGATCCG GACCCGACTG GGGGAACGCA AATGGGTGAG GGATCATTCC
TTCCCCTGGT ACGACGAGTC GGGAGGCCTT GTGGGCTCCG TCGGCATCCT ATCGGACGTG
ACGGAATGCA AGCGGGCGGA GGAGGCGTTG CAGGAAAGCG AGGAACGGTT CAGAAACATG
GCCGGCCTCT CTCCGTTCCC TATTGCCATC GTCGACCGGA ATGGAAAGAT CATTTACCTC
AACCAGAGGT TCGTCGATCT GTTCGGGTAC ACTGCAAGCG ACATCCCGAC GCTGTGGGAC
TGGTTCAACC AGGCTTGTCC GGACCCCGGG GAAAGCCGGA CGATCATCGA AAGGATACGG
TCGGACCTGC AAGCCGCATC GAAATACGAG GTCATCAGCC ACGAGCACAG GGTTCGGTGC
AAGGATGGTT CGAGCCGGGA AATCCGATTC CGCCTGGTGT CCATGGAAAA CGGCGATAAG
TTCGTCACCT GCGAAGACCT GACCGAGCAT ATGAAGATCC AGGAGGAACG CATCAAGGCC
AGCAAGCTGG AATCCATCGG CGTTCTTGCG GGTGGTATTG CACATGATTT CAATAATATC
CTGACAGCCA TCATCGGCAA TATTTCACTG GCAAAATTGT ACGGCGGGCA GGGCGGCAGG
GTCTCCGAGA AGTTGACGGA GGCCGAGCGG GCATGCATGC GCGCGAAGAA CCTCACGCAG
CAGTTGCTGA CCTTCTCGAA AGGCGGGGAG CCCATAAAAA AGGTAATCGA CGTCTCCGAT
TTCCTCCATG AAGCGGTGCA TTTTGTCCTG ACCGGCTCGA ATGTCCGGAG CGTCTTCTTT
CTTCCCGACG ACCTTTGGCC CGTTCAGTGC GATGAAGGCC AGATGGGGCA GGTGATCAAC
AACCTGATCA TCAATGCCAA GCAGGCCATG CCTGACGGAG GTACAATCGA GATATCCGCC
GAGAACGTCA TCCTCAACGC CGGGGATCAG GCTCTGCCGC TCAAGCCGGG CCGATACTTG
CGGATCGGAG TGAAAGATTA CGGGCATGGG ATACCGGAAG AGGCACTGAC GCGCATTTTC
GATCCCTACT TCACGACCAA GCTCAAGGGA AGCGGTCTTG GGCTTGCCAC TGCCTATTCC
ATCATCAAGA AGCACGAGGG ATACATCCAG GTCGAGTCGC GAGTCGGAGA AGGGGCCGCA
TTTCACATCT ATCTGCCTGT GGCGGGATGG TCTCTGCGGG AGCACGACAA AATGGGCGAC
GACACACTTC GCGGACGGGG CCGGGTCCTC GTCATGGATG ATGAGGACAT CATTTTGAAC
TGCACCTACG ATCTTCTGAG ATACCTGGGG TATGAAGTCG AGCTCGCCCG GGACGGGGCC
GAAGCGGTGG AGTTGTACCA GGAAGCCGTG GGGCTGTCGC GTCCCTTCGA TGCCGTTATC
ATGGACTTGA CCGTTCCCGG GGGGGTGGGC GGAGTCGAGG CGATGCAAAG GCTTCGCGAA
ATCGACCCCA AGGTGAACGC CATCGTTTCG AGCGGCTACT CCAACGATCC CATCATGTCT
CAGTACCGTG AATACGGTTT TCGGGGGGTG ATCACCAAGC CGTACAAGTT GGAACAGATC
GGGGAACTGC TCAAAACAAT CGTCCGGCGC AAGTGGGACG CGGTCGAGTA A
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| Protein sequence | MPAWAFRFMP VLTKRSFTDK VQTSVALFRT MKNDTPGGPQ WIAPSLEGNA VKVSMESPED
AMSECSSLRE RVRELESAEN PFRTALEDHD ELIVRFRPDF TLVYANQAYC RHLADTEAPC
VGGNFLDCVN PADHDRVREE IGSLVPDGPV KTVEHGVLLG GREVRLSRWV YRAMIGERTD
VIEYLGMSCV QGERIAHPGP WNEYRFLAEK TGNAAYRLRC DSRTYDHLGP AITRLTGYPL
DEFDVSKFSE LIEKIEIPGE EDVTPDTLIG FRKEGRTGEY RADYLIRTRL GERKWVRDHS
FPWYDESGGL VGSVGILSDV TECKRAEEAL QESEERFRNM AGLSPFPIAI VDRNGKIIYL
NQRFVDLFGY TASDIPTLWD WFNQACPDPG ESRTIIERIR SDLQAASKYE VISHEHRVRC
KDGSSREIRF RLVSMENGDK FVTCEDLTEH MKIQEERIKA SKLESIGVLA GGIAHDFNNI
LTAIIGNISL AKLYGGQGGR VSEKLTEAER ACMRAKNLTQ QLLTFSKGGE PIKKVIDVSD
FLHEAVHFVL TGSNVRSVFF LPDDLWPVQC DEGQMGQVIN NLIINAKQAM PDGGTIEISA
ENVILNAGDQ ALPLKPGRYL RIGVKDYGHG IPEEALTRIF DPYFTTKLKG SGLGLATAYS
IIKKHEGYIQ VESRVGEGAA FHIYLPVAGW SLREHDKMGD DTLRGRGRVL VMDDEDIILN
CTYDLLRYLG YEVELARDGA EAVELYQEAV GLSRPFDAVI MDLTVPGGVG GVEAMQRLRE
IDPKVNAIVS SGYSNDPIMS QYREYGFRGV ITKPYKLEQI GELLKTIVRR KWDAVE
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