Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0215 |
Symbol | |
ID | 4461478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 252205 |
End bp | 252969 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639700969 |
Product | hypothetical protein |
Protein accession | YP_844351 |
Protein GI | 116747664 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.79026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.274516 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCGAA AACGCTTCTT TGTGGAAAGG GCCGTTCCCG GCGAAGGAAC GATTGATCTC GGCGTTGACG CCGCGCACCA TATCGAACAT GTGCTCCGTC TCAGAGCCGG AGAAGAAGTG GAGCTGATCG ACGGGGTTGG TGGCGGCTGG CTGGGCGCAA TCGTGGAAGC GGGAACGGGA ACGGTGCGGG TGAGGATTAC CGGCAGGCTC GGTCCGCCCG CCGAATCTTC GCTCAATCTT TCACTGGCGT TGGCTTTTTC CCGTGCCGAC CGGATGGACC TGGTTCTGAG GCAGGCTACG GAAATCGGTG TGAACCGGTT CATCGCTTTC AGATCGCGGA GAAGCCAGTA CGCTCTGACG GGCAGGGCGG CGGGAAAGAG GCTGGAACGC TGGCAGAGGA TCGCGCGCGA GGCGGTCTGC CAGTGCGGTA GACTGAACGT GCCCGAGATG GTCATTCTCT CGGACGTTCG GGAATTGCTC GCGAAGATCG AACAGAGGGA GCGTTCCGGA AACCTGCTGC GGATTCTCGC CTTCGAGAGA GGGAACGGCA AGGGCATCGT GGATTTGCAT CGCGCATTTC CGCAGTGCAC GGAGGTGATG GTTGCGGTCG GGCCGGAAGG GGGATGGAGC TCCGAAGAGG CGGAGCTGCT GACCCGCAAT GGTTTTCATG CGGTCCATCT GGGGCCGAGG ATTCTACGTC TGGAGACGGC GGCGGCCATT GTGTTGTCGT CGGTCCAACT GTTGTGGGGC GATTTGGGTG CATGA
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Protein sequence | MTRKRFFVER AVPGEGTIDL GVDAAHHIEH VLRLRAGEEV ELIDGVGGGW LGAIVEAGTG TVRVRITGRL GPPAESSLNL SLALAFSRAD RMDLVLRQAT EIGVNRFIAF RSRRSQYALT GRAAGKRLER WQRIAREAVC QCGRLNVPEM VILSDVRELL AKIEQRERSG NLLRILAFER GNGKGIVDLH RAFPQCTEVM VAVGPEGGWS SEEAELLTRN GFHAVHLGPR ILRLETAAAI VLSSVQLLWG DLGA
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