Gene Sfum_0195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0195 
Symbol 
ID4461545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp231736 
End bp232056 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content60% 
IMG OID639700950 
Productbranched-chain amino acid transport 
Protein accessionYP_844332 
Protein GI116747645 
COG category[S] Function unknown 
COG ID[COG4392] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.392711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAA CCGAATACCT CCTCCTGGTT GCCGGCATGG GACTGGTGAC CTACCTGCTT 
CGCTGGGTGC CGCTCTTCTT CTTCTCGCGA ATGGTCCTGC CCCGCGGGCT GGTGGAGTGG
CTGGACCTGA TCCCGGTTTC CATCATGAGT GCGCTGGTCT TCCCGGACCT TCTGACCTCG
GGGGCTCCGA AACATCTCGA TCTCTTCCAG GTGAAATCCA TCGTGGCCGT TCCCACCCTG
CTTTTTGCTT TCAAGACGAA GTCCCCGGGA GGAACCGTCC TGGTCGGCAT GCTTCTGTAC
TGGCTGGCGG GGAGACTTTG A
 
Protein sequence
MPETEYLLLV AGMGLVTYLL RWVPLFFFSR MVLPRGLVEW LDLIPVSIMS ALVFPDLLTS 
GAPKHLDLFQ VKSIVAVPTL LFAFKTKSPG GTVLVGMLLY WLAGRL