| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0193 |
|---|
| Symbol | |
|---|
| ID | 4461543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 230173 |
|---|
| End bp | 231000 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639700948 |
|---|
| Product | nicotinate-nucleotide pyrophosphorylase |
|---|
| Protein accession | YP_844330 |
|---|
| Protein GI | 116747643 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.422713 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAAC TGGATGTCCT GCTTCGAATG GCGCTGGTCG AGGACGTGGG GCACGGCGAC
GTGACCACCG AGGGCACGAT CGATGCGGGG CTCACGGGAC GGGCCGTCGT CTTCGGGCGC
GAACCTTTGG TGCTCTCGGG GTCCGATCCT TTCAGGAGAA CATTTCGCCT GGTGGATCCG
CAGGTGCGCG TCGAATCCCT TTTTTCCGAC GGGGAAGAGG TTCCGGCCGA TGTCCCGTTC
TTCAGGATGG AAGGCAGCGT ACGCTCGCTG CTGACGGCGG AACGCACGGC GCTCAACCTG
CTGCAGAGGC TTTCGGGTGT GGCCACCTTG ACGCGCCGAA TGGTGAACGC TCTGGCCGGA
ACGTCCTGTC GCCTGCTCGA TACGCGCAAG ACCACACCGC TGTGGCGTGT CCTGGAGAAA
GCCGCGGTCC GACACGGCGG CGGCTCGAAC CACCGCTTCG GTCTCTTTGA CGGGGTTCTG
ATCAAGGACA ACCATGTGGC CGCGGTCGGC GGGGTGCGCG AGGCGGTTCG CAGGGCACGC
CGCTCGGCGC CGCACGGGCT CAAAATCGAG GTGGAGGTGG AAACCCTGGA ACAGCTCGAG
GAAGCCCTGC AGGCCGGGGC CGATATCATT TTGCTGGACA ACTTCACCCT CGATTTGCTC
CAGCGCGCCG TCGCAATCAA CGCAGGCCGC GCGTTGCTGG AAGCCTCCGG CGGGGTCACG
CTCGAACGCG TTCGCGTTAT CGCCGAAACC GGCGTGGATT TCGTGAGTTG CGGGGCGCTG
ACCCATTCCG CACCGGCCGT CGATATCACC ATGGAATACT CCTCGTAG
|
|---|
| Protein sequence | MDQLDVLLRM ALVEDVGHGD VTTEGTIDAG LTGRAVVFGR EPLVLSGSDP FRRTFRLVDP
QVRVESLFSD GEEVPADVPF FRMEGSVRSL LTAERTALNL LQRLSGVATL TRRMVNALAG
TSCRLLDTRK TTPLWRVLEK AAVRHGGGSN HRFGLFDGVL IKDNHVAAVG GVREAVRRAR
RSAPHGLKIE VEVETLEQLE EALQAGADII LLDNFTLDLL QRAVAINAGR ALLEASGGVT
LERVRVIAET GVDFVSCGAL THSAPAVDIT MEYSS
|
|---|
| |