| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0190 |
|---|
| Symbol | |
|---|
| ID | 4461540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 225125 |
|---|
| End bp | 226159 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639700945 |
|---|
| Product | deoxyguanosinetriphosphate triphosphohydrolase-like protein |
|---|
| Protein accession | YP_844327 |
|---|
| Protein GI | 116747640 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0232] dGTP triphosphohydrolase |
|---|
| TIGRFAM ID | [TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.230443 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGCCACG AGTTGGAGGA ACGTGAAGCA CGGTTTCTCG ATCCCCGTGC GCAGCTCAGC
AGGGAGACCA GAGGACGGCT GAAACCCGAG ACGGAATGCA CTCTGCGCAC GGCCTACCAG
CGGGACCGCG ATCGAATCGT TCACTGCAAG GCTTTCAGAA GGCTGAAACA CAAGACTCAG
GTCTTCCTGT CTCCGACGGG AGACCACTAC CGTACGCGGC TCACGCACAC CCTGGAAACC
TCCCAGATTG CCCGCACCAT CGGCAGGGCG CTGGCCTTGA ACGAAGATCT TATCGAGGCC
GTCGCGCTCG GACACGACTT GGGCCACACG GCGTTCGGCC ACGGGGGCGA GAGCGTGCTC
AACGATCTCG TTCCCGGAGG TTTCTTTCAC AACGAGCAGA GCCTGCGCAT TGTCGACATC
CTCGAAAAAA ACGGGGAGGG GCTCAATCTC ACCCACGAAG TGCGCGACGG CATCCTCAAA
CATTCCAAGG GGCGCGCGGA TCCGATCCTG CTCGACCCTG AAGCCAGAGC GGAAACGCTG
GAAGGTCAGG TGGTCCGGGT TGCGGACATC ACGGCTTATC TCAACCATGA CCTGGACGAC
GCCCTGAGGG CTGAAATCCT CAGTGCCGAT GCCATTCCCC CCGATATCCG GATGCACCTC
GGAGCCCGTC ATTCTCAGCG CATCCACGCG ATGGTCGAGG ATGTCATTCA CTCGACCCTG
GAGGGCGATC TCATCGAAGT GCGCATGAGC GAGGCGATGC TCGCCCGGGT TGACCAGCTC
AGGGAGTTCC TTTTCGAGCA CGTTTACGAT CTGCCTCAGG TCAGGGAAGA ATTCAGGCGC
GTCCGGAAGA TCATCGAGGA TCTCTTCGAC GTACTGATGA AGGATGATGC GGTGTTTCGG
GAAGAGATCG GCACGCCGCG CGACGGCACG CTCAAGGAGC GGCAGGTGTA CGACCATATC
GCGGGAATGA CTGACCGTTA CGCTCTCGAC CTGTACAAAA AGATCTTTCT TCCCAAGCCA
TGGATGAAAC TGTGA
|
|---|
| Protein sequence | MRHELEEREA RFLDPRAQLS RETRGRLKPE TECTLRTAYQ RDRDRIVHCK AFRRLKHKTQ
VFLSPTGDHY RTRLTHTLET SQIARTIGRA LALNEDLIEA VALGHDLGHT AFGHGGESVL
NDLVPGGFFH NEQSLRIVDI LEKNGEGLNL THEVRDGILK HSKGRADPIL LDPEARAETL
EGQVVRVADI TAYLNHDLDD ALRAEILSAD AIPPDIRMHL GARHSQRIHA MVEDVIHSTL
EGDLIEVRMS EAMLARVDQL REFLFEHVYD LPQVREEFRR VRKIIEDLFD VLMKDDAVFR
EEIGTPRDGT LKERQVYDHI AGMTDRYALD LYKKIFLPKP WMKL
|
|---|
| |