| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0110 |
|---|
| Symbol | |
|---|
| ID | 4461392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 133900 |
|---|
| End bp | 135246 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639700866 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_844248 |
|---|
| Protein GI | 116747561 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4198] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.765018 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAGA TTGCCCCGTT TCGCGGATTG CGCTACAGTC CGAAAGCAGC GCCGGATCTT
GCAAAGGTCG TCATTCCACC TTACGACGTC ATCTCACCCG CCGAGCAGGA GCTCTTTCTG
CATACCAGCC CTTACAACAT GGTTCACCTG GAGCTGGGCA GGAGCGACCG CTCGGACACA
CCGGAGAACA ACAGTCACAC CCGCGCGGGA CGCACCTTCG AGGATTGGGT GCGAAATGGA
GTGCTGGTTC GCGAGGCGCT GCCGGCCGTG TATTATTACG AGCTCGACTA CGCGCTCTCG
CCCGGAAAGG AGGCCACGCG CCGCGGCTTC ATCTGCGCCA TGCGCCTGGA GGACTTCCGA
TCCGGCACGG TGCGTCCCCA CGAAAAGACC TTTCAGGCAG TCAAGGATGA GCGCCTGGGT
CTGATGCTGT CCTGCGGAGC GAACCTCAGT TCGGTGTTTT CACTGTATTC GGACCCCGAA
AGCGTCGTGG ACGAAACGCT CCGGTCGGGC CGTGAAGCCG CACCGGCCAT GGCTTTCGTG
GACCGCCAGG GAATGAGCCA CCGCATCTGG AGGGTGACCG ACCGCGGCGT GTTGCAGCGT
GTGGCGGAGC TGATGAAGGG GAAGGCTATT TTCATTGCGG ACGGGCATCA CCGTTATGAA
ACCGGCCTGA ATTACCGGGA CCTCCAGAGA CGGCGGAATC CGTCGGCCGG TCCGCATGCC
GCGTTCGAGT ACATTATGAT GTATTTGTCC AACCTCAATC AGGAAGGGCT CACGATTCTT
CCCACCCACA GGCTGCTCAG AAACCTCGGC TCGTGGGATC CCGAATCGAT CTTGAAAAGA
GCCGAAGCAT TCTTTGAGGT GAAGCGGTTT TCATCCGACG TTCCGGGGGA GCGCATGCTG
TGCTCCGAAC TGGCGTCGCG GGGGGACCGC AAGGAAACCG CCATCGGGTT TTTCTGGGAC
AACGTCGGGT CCTTTTTCCT TTTGTCCGCG AGAAGAGAGC CCGTCTCGTC CTATCTGGCC
GGCAGGGGTA TTCCCGTGGA AACGCGCGGT CTCGATGTGG TGGTTTTGGA TCAGGTCGTT
TTGCGGAACC TGTTGGGGCT TTCGGAGGAG TACCTGTCCA GCGAGCACAA TATTCACTTT
AAACACGATC TCGCGGAGAG CATCGGCGCA GTCCGGTCCG GAGACTATGA GGCCGCTTTT
CTCATCAACC CGACCCGGAT CGAACAGGTC CAGGAAGTGG CGAGCGCAAA GCTCGTCATG
CCCCACAAGT CCACCTACTT CTATCCGAAG GTCGGCAGCG GAATGGTGAT CCGTTCGCTG
TCGCCCGAAG AGGAGACGGT CTGGTAG
|
|---|
| Protein sequence | MAEIAPFRGL RYSPKAAPDL AKVVIPPYDV ISPAEQELFL HTSPYNMVHL ELGRSDRSDT
PENNSHTRAG RTFEDWVRNG VLVREALPAV YYYELDYALS PGKEATRRGF ICAMRLEDFR
SGTVRPHEKT FQAVKDERLG LMLSCGANLS SVFSLYSDPE SVVDETLRSG REAAPAMAFV
DRQGMSHRIW RVTDRGVLQR VAELMKGKAI FIADGHHRYE TGLNYRDLQR RRNPSAGPHA
AFEYIMMYLS NLNQEGLTIL PTHRLLRNLG SWDPESILKR AEAFFEVKRF SSDVPGERML
CSELASRGDR KETAIGFFWD NVGSFFLLSA RREPVSSYLA GRGIPVETRG LDVVVLDQVV
LRNLLGLSEE YLSSEHNIHF KHDLAESIGA VRSGDYEAAF LINPTRIEQV QEVASAKLVM
PHKSTYFYPK VGSGMVIRSL SPEEETVW
|
|---|
| |