| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0094 |
|---|
| Symbol | |
|---|
| ID | 4461405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 114367 |
|---|
| End bp | 115656 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639700847 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_844232 |
|---|
| Protein GI | 116747545 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000112737 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | TTGGATGTCG AACCAGCGAC GGAATCAAAG ACCATGAATC CATTCAGTCA ACTGTTTGGG
CTGTGTGCGG TGGGTTTCTT CGCCCGGTTG TCCTATGCCC TGGCCAGAAG TCCGGTGTTG
CCCCTCTTCG CCCTCTATCT GGGGGCAGCA CCAGAGATCA TTGGCTGGGT CGTGGGCATT
TCCACGGTGA CGGGGATTTT TTTCAAACTC CCCTCCGGTG CGCTGTCGGA TGTCATCGGC
CGTCGAAAAA CCATGCTGGT GGGCCTGGTC GTCTTTGCCC TGACCCCCTT CGCCTACTTC
TGGGTAAAAG ATGCCGCGCT GCTGCTCATC GTTCGTTTTG TTCACGGATT CGCCACGGCC
GTTTACGGCC CCGTGGCCAT GGCGGTGGTG GCCGACGTGG CGGGGTGCCG CAAGGGAGAG
ATGCTCTCCT GGTTCTCGTC GGTCACCATC GCCGGTAGCC TCCTGGGGGC CCCCCTGGGA
GGTTTTTTGT TGTTCACCCT GGCGCGATCC GGCAGCCCTT CCCTGGAGCA CTTCCACTGG
GTTTACCTGG CAAGCGGGGC GTTCGGATGT GTGGCTCTGA TACTGGGGGG AAAACTCCTT
GCCGGTGGAG ATGAAACCGT GACCCAAGTG GGTCTCAAGG CATCGCTCGC ACAGTTCGGA
GCCGGGATTC GGGAGGTGGT GAGCGACCGC AGAGTGGTTC TTACCTCCAG CATGGAAGGG
CTCCAGAACA TGACCATGGG CGCCCTGGAG GCCTTCCTTC CCATCTACGC GGTGAAAGTG
GCCGGGCTCA ACGAATTCCA GGCCGGTCTC CTGTGGGGGG CGCAAGTGCT CGTCACCATC
GTGTCCAAAC CCTTGATGGG TCGCCTCTCG GACCGCTACG GGCGCAAACC GGCCATCGTC
ATCGGCATGT TGGCTTGTGC CGTGGCCTTT GCCGCAATCC CCCTTCTTAC ACGGTTTGAG
CTTTTGATTT TGGCTTCACT CCTGTTCGGT CTGGGGGAAG CCTTCGTGAC CTCGTCTTCG
GCGGCTCTGG TTGCCGACCT TTGCCAGGAA CGGCATTTTG GCACGGCCAT GGGGACCTTC
GGGACCATCT TCGATGTGGG CCATGCATCG GGTCCCATTC TGGCGGGGGT GCTCATCGCC
TCCTGGGGCT ACCTTCCGGC CTTCTCCATC ATGAGCGCCG CGCTGGTTGT TGCCCTCCCG
GTCTTTATCC TGGGGGTAAA GGTGGAATCT CGAACATCCA TGGTCACTTC GCGCGTTTGG
CGTCGTCGTC ACCGGAAAGG ATTGCCGTGA
|
|---|
| Protein sequence | MDVEPATESK TMNPFSQLFG LCAVGFFARL SYALARSPVL PLFALYLGAA PEIIGWVVGI
STVTGIFFKL PSGALSDVIG RRKTMLVGLV VFALTPFAYF WVKDAALLLI VRFVHGFATA
VYGPVAMAVV ADVAGCRKGE MLSWFSSVTI AGSLLGAPLG GFLLFTLARS GSPSLEHFHW
VYLASGAFGC VALILGGKLL AGGDETVTQV GLKASLAQFG AGIREVVSDR RVVLTSSMEG
LQNMTMGALE AFLPIYAVKV AGLNEFQAGL LWGAQVLVTI VSKPLMGRLS DRYGRKPAIV
IGMLACAVAF AAIPLLTRFE LLILASLLFG LGEAFVTSSS AALVADLCQE RHFGTAMGTF
GTIFDVGHAS GPILAGVLIA SWGYLPAFSI MSAALVVALP VFILGVKVES RTSMVTSRVW
RRRHRKGLP
|
|---|
| |