Gene Sfum_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0084 
Symbol 
ID4461395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp101883 
End bp102251 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content63% 
IMG OID639700837 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_844222 
Protein GI116747535 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000718119 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000880793 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTCAATGA AACTTTATGT GGGCAACCTG TCTTTTCAGA CTTCCAGCGA GCAGCTGCGG 
GAACTCTTCT CGCAGGTCGG CACGGTGGAG TCGGCCACTG TCGTTGAGGA CCGTGAATCG
GGACGGTCGC GCGGTTTTGG CTTTGTTGAA ATGTCGACCA AGGAGGAAGG CCAAAAGGCC
ATCGCCGAGC TCAACGGGAA GGATTTTAAC GGCAGGCCCT TGACCGTCAA TGAAGCCAAG
CAGAGGGAAG ACCGGGGACG CGGCGGGCCC CGTGGGGGAT CCGGCGGCGG CCGTGGCGGC
TACGGCGGAG GTGGAGGCCG CGGCGGCGGA TTCGGCGGCG GCGGTGGTGG AAGGAAGAAA
GGCTGGTAA
 
Protein sequence
MSMKLYVGNL SFQTSSEQLR ELFSQVGTVE SATVVEDRES GRSRGFGFVE MSTKEEGQKA 
IAELNGKDFN GRPLTVNEAK QREDRGRGGP RGGSGGGRGG YGGGGGRGGG FGGGGGGRKK
GW