Gene Sfum_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0078 
Symbol 
ID4461168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp95481 
End bp96761 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content61% 
IMG OID639700830 
Productphosphopyruvate hydratase 
Protein accessionYP_844216 
Protein GI116747529 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0148] Enolase 
TIGRFAM ID[TIGR01060] phosphopyruvate hydratase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.983155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000170876 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCGAGA TTCTCTCCGT TAAAGCCAGA GAGATCCTGG ATTCGCGAGG CAATCCCACC 
GTCGAAGCCG AGGTCATCCT CGACAGCGGT TATTCCGGCA CCGCCGCTGT CCCTTCCGGG
GCTTCCACGG GCTCCAGGGA GGCCCTCGAA CTGCGTGACG GGGACCCCGC CCGATACCTC
GGCAAAGGAG TGCTACAGGC GGTTCAAAAT GTCAATGATG AAATCGCTCC CAAAGTCATC
GGCATGGACG GGCGCGACCA GGTCGGCCTG GACAGTTTTC TGATCGAATT GGACGGAACG
GAGAACAAGG GCCGCCTGGG TGCAAACGCA ATCCTTTCCG TGAGCATGGC CGCGGCCAAA
GCGGCGGCGG CCGAGTGCGA GCTTCCCCTG TACCGGTACC TGGGCGGGGC CATGGCCTCT
CTTCTTCCGG TGCCCATGAT GAATGTGATC AACGGCGGCG CTCACGCCGA CAACAACGTG
GACATCCAGG AGTTCATGAT CGTTCCCGCG GGCGCGCCGA CCTTCGGCGA GGCCCTGAGA
ATGGGAGCCG AGACCTTTCA CAACCTCAAA AAGGTGCTCA AGTCCAAGGG ATTGAACACC
GCCGTGGGTG ATGAGGGCGG GTTCGCTCCC AACCTGAGCT CCAATGAAGA AGCCATGGAA
GTGCTCATGC AGGCTATCGA GGCGGCCGGG TACCGACCGG GCGAGGACAT CTACATCGCC
ATCGACGCCG CGGCCAGCGA ATTCTACAAG GACGGCTCCT ATCACATGAG CGCCGAACAG
AGCCCGACGA AAAGCGCCGA GGAGATGATC GCATTCTACG AAGCCTGGGC AGGGCGCTAT
CCGCTCATCT GCATCGAGGA CGGCATGGCG GAAGGCGACT GGGGCGGGTG GCAGGCGCTC
ACCCGGAAGC TCGGCTACAA TGTCCAGTTG GTGGGCGACG ACGTGTTTGT GACGAACACG
AGCATCATTG CAAAAGGCAT CGCTGACGGA GTGGCCAATT CGGTTCTCAT CAAGCTGAAC
CAGATCGGCA CCGTGACCGA GACCCTCCAG GCCATCAATA TGGCCTTCAA AGCCGGTTAC
ACCGTGGTCA TCTCCCACCG CTCGGGAGAG ACCGAGGACA CGACGATCGC CGACCTGGCC
GTCGCCACCA ACGCCGGTCA GATTAAGACG GGGTCCCTTT CGAGGTCGGA GCGGATCGCA
AAGTACAACC AGTTGCTCCG GATCGAGGAA GAGCTCGGGG CTTCGGGTTG CTACGCCGGA
ATGTCGGCGT TTCGAGTCTA G
 
Protein sequence
MSEILSVKAR EILDSRGNPT VEAEVILDSG YSGTAAVPSG ASTGSREALE LRDGDPARYL 
GKGVLQAVQN VNDEIAPKVI GMDGRDQVGL DSFLIELDGT ENKGRLGANA ILSVSMAAAK
AAAAECELPL YRYLGGAMAS LLPVPMMNVI NGGAHADNNV DIQEFMIVPA GAPTFGEALR
MGAETFHNLK KVLKSKGLNT AVGDEGGFAP NLSSNEEAME VLMQAIEAAG YRPGEDIYIA
IDAAASEFYK DGSYHMSAEQ SPTKSAEEMI AFYEAWAGRY PLICIEDGMA EGDWGGWQAL
TRKLGYNVQL VGDDVFVTNT SIIAKGIADG VANSVLIKLN QIGTVTETLQ AINMAFKAGY
TVVISHRSGE TEDTTIADLA VATNAGQIKT GSLSRSERIA KYNQLLRIEE ELGASGCYAG
MSAFRV